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Report for CCDS30638.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30638.1 Public Homo sapiens 1 MACO1 24 110 108 CCDS HistoryNCBI Gene:55219Re-query CCDS DB by CCDS ID:30638.1Re-query CCDS DB by GeneID:55219See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30638.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374343.5 ENSP00000363463.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374343.5Link to Ensembl Protein Viewer:ENSP00000363463.4Re-query CCDS DB by Nucleotide ID:ENST00000374343Re-query CCDS DB by Protein ID:ENSP00000363463
Original member Current member NCBI NM_018202.6 NP_060672.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018202.6Link to Protein Sequence:NP_060672.2Re-query CCDS DB by Nucleotide ID:NM_018202Re-query CCDS DB by Protein ID:NP_060672Link to BLAST:NP_060672.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060672.2 664 Q8N5G2-1 664 100% 0 0

Chromosomal Locations for CCDS 30638.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 25431099 25431178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25446762 25446903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25448808 25448934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25454259 25454382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25456653 25456831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25458391 25458892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25484116 25484274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25485613 25485795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25489173 25489293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25491410 25491584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25498264 25498466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1995 nt):
ATGAAGCGGCGGAACGCCGACTGCAGTAAGCTCCGCCGCCCCCTAAAGCGGAACCGGATCACCGAGGGCA
TT
TACGGCAGTACATTTTTATACCTGAAATTCCTGGTGGTGTGGGCACTTGTCCTCCTAGCAGATTTTGT
C
CTGGAGTTCAGATTTGAATACCTGTGGCCATTCTGGCTTTTCATCAGAAGCGTCTATGATTCCTTCAGA
TAC
CAGGGACTGGCCTTCTCAGTATTTTTTGTTTGTGTAGCATTCACGTCAAATATAATATGCCTGCTGT
TC
ATCCCCATACAGTGGCTTTTTTTTGCTGCTAGCACATATGTATGGGTTCAGTACGTATGGCACACAGA
A
AGGGGAGTGTGTTTGCCTACAGTGTCTCTCTGGATCCTCTTTGTTTATATTGAAGCAGCCATTAGATTT
AAA
GATCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTGCTCACTGTATTGGGTACCCTGTGG
TA
ACTTTGGGGTTTGGCTTCAAAAGTTACGTAAGCTACAAAATGCGGTTAAGGAAGCAAAAAGAAGTACA
A
AAAGAGAACGAGTTTTACATGCAACTTCTTCAACAAGCTCTCCCTCCAGAGCAACAGATGCTACAGAAG
CAA
GAAAAAGAGGCCGAGGAAGCAGCCAAAGGATTACCTGATATGGATTCTTCGATCCTTATACACCACA
AT
GGAGGTATCCCAGCCAACAAAAAACTCTCCACAACTTTGCCAGAGATAGAATACCGAGAAAAAGGGAA
A
GAAAAGGACAAGGATGCCAAAAAACACAACCTTGGAATAAATAACAACAATATTCTACAACCTGTAGAC
TCT
AAAATACAAGAGATTGAGTATATGGAAAACCATATCAATAGTAAAAGATTAAATAATGATCTTGTGG
GA
AGTACAGAAAATCTCTTGAAAGAGGACTCATGCACTGCTTCCTCAAAAAATTACAAAAATGCCAGTGG
A
GTTGTGAACTCTTCACCTCGAAGTCATAGCGCCACAAATGGGAGCATTCCTTCCTCATCTAGTAAAAAT
GAG
AAGAAGCAGAAATGCACTAGCAAGAGCCCAAGTACACACAAGGACTTAATGGAAAACTGTATTCCTA
AT
AACCAGCTAAGCAAACCAGACGCACTGGTCAGGCTGGAACAAGACATTAAAAAGTTAAAGGCTGACCT
G
CAAGCCAGCAGACAAGTGGAACAAGAGCTCCGCAGTCAGATCAGCTCCCTTTCGAGCACCGAGCGAGGG
ATC
CGCTCAGAAATGGGCCAGCTTCGGCAGGAGAACGAGCTGCTGCAGAACAAGTTACATAATGCTGTGC
AA
ATGAAGCAAAAAGACAAGCAGAATATCAGCCAGTTGGAGAAAAAGCTAAAAGCTGAGCAGGAAGCCCG
A
AGTTTTGTAGAGAAACAGTTAATGGAAGAGAAAAAGAGGAAGAAGTTAGAAGAAGCCACTGCTGCCCGG
GCT
GTTGCGTTTGCTGCTGCATCTAGGGGAGAATGCACCGAAACCTTACGGAATCGGATCAGAGAACTAG
AA
GCAGAGGGCAAGAAGCTCACGATGGACATGAAGGTGAAAGAAGACCAAATCAGAGAACTAGAACTAAA
A
GTCCAGGAGCTTCGGAAATATAAGGAAAATGAGAAGGACACTGAGGTGTTAATGTCAGCCCTCTCAGCC
ATG
CAAGACAAAACACAGCACCTGGAGAACAGCTTAAGTGCAGAGACGAGAATCAAGCTGGACCTGTTCT
CC
GCACTGGGCGATGCAAAGCGGCAGCTCGAGATTGCCCAAGGACAAATCCTTCAGAAAGATCAGGAAAT
C
AAGGACCTAAAACAGAAGATAGCCGAAGTCATGGCCGTCATGCCCAGCATAACATACAGTGCCGCCACC
AGC
CCCCTGAGCCCTGTTTCCCCCCACTACTCTTCCAAATTTGTGGAGACCAGCCCCTCTGGACTTGACC
CC
AATGCCTCTGTTTACCAGCCCCTGAAGAAATGA


Translation (664 aa):
MKRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFR
Y
QGL
AFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRF
K
DLKNFHVDLCRPFAAH
CIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQK
Q
EKEAEE
AAKGLPDMDSSILIHHNGGIPANKKLSTTLPEIEYREKGKEKDKDAKKHNLGINNNNILQPVD
S
KIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNASGVVNSSPRSHSATNGSIPSSSSKN
E
KKQKCTSKSPSTHKDLMENCIPNNQLSKPDALV
RLEQDIKKLKADLQASRQVEQELRSQISSLSSTERG
I
RSEMGQLRQENELLQN
KLHNAVQMKQKDKQNISQLEKKLKAEQEARSFVEKQLMEEKKRKKLEEATAAR
A
VAFAAAS
RGECTETLRNRIRELEAEGKKLTMDMKVKEDQIRELELKVQELRKYKENEKDTEVLMSALSA
M
QDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQ
GQILQKDQEIKDLKQKIAEVMAVMPSITYSAAT
S
PLSPVSPHYSSKFVETSPSGLDPNASVYQPLKK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser