NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS30176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30176.1 Public Mus musculus X Tmem185a 23 108 98 CCDS HistoryNCBI Gene:236848Re-query CCDS DB by CCDS ID:30176.1Re-query CCDS DB by GeneID:236848See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30176.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101506.9 ENSMUSP00000099043.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101506.9Link to Ensembl Protein Viewer:ENSMUSP00000099043.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000101506Re-query CCDS DB by Protein ID:ENSMUSP00000099043
Original member Current member NCBI NM_001033328.3 NP_001028500.1 Accepted alive Link to Nucleotide Sequence:NM_001033328.3Link to Protein Sequence:NP_001028500.1Re-query CCDS DB by Nucleotide ID:NM_001033328Re-query CCDS DB by Protein ID:NP_001028500Link to BLAST:NP_001028500.1

Chromosomal Locations for CCDS 30176.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70461048 70461292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70462191 70462314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70462845 70463021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70467154 70467361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70470118 70470294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70476978 70477015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGAACCTGAGGGGCCTCTTTCAGGACTTCAACCCGAGTAAATTCCTCATCTATGCCTGTCTGCTGCTGT
TCTCTGTGCTACTGGCCCTTCGTTTGGATGGCATCATTCAATGGAGCTACTGGGCTGTCTTTGCTCCAAT
ATGGTTGTGGAAGTTAATGGTCATTGTTGGCGCATCAGTTGGAACTGGAGTTTGGGCACGAAATCCTCAG
TATCGAGCAGAAGGAGAAACATGTGTGGAGTTTAAAGCCATGTTAATTGCTGTGGGCATCCATTTGCTCC
TGCTGATGTTTGAAGTTCTGGTCTGTGACAGGATTGAGAGAGGAAGCCATTTCTGGCTTCTGGTCTTCAT
GCCATTGTTCTTTGTTTCCCCAGTGTCTGTTGCAGCATGTGTCTGGGGCTTTCGACATGACAGGTCACTA
GAGGTTGTGTGTGTCCCTCTGTGGATTCTCATGTCCTTCTTGTGCCTGGTGGTCCTCTATTACATCGTTT
GGTCGGTTCTGTTCCTGCGCTCTATGGATGTGATTGCAGAACAACGCAGAACACATATAACCATGGCACT
GAGCTGGATGACCATTGTCGTGCCTCTTCTTACTTTTGAGATCCTGCTGGTTCACAAACTGGATGGCCAC
AATGCTTTCTCCTGTATTCCAATATTTGTTCCCCTGTGGCTCTCATTGATCACACTGATGGCAACAACAT
TTGGACAGAAAGGAGGAAACCACTGGTGGTTTGGTATTCGCAAAGACTTCTGCCAGTTTCTGCTTGAAAT
ATTCCCGTTTTTGAGAGAGTATGGAAACATTTCATATGATCTCCACCATGAAGATAGTGAGGAAACAGAA
GAAACCCCAGTTCCAGAACCTCCTAAAATTGCACCTATGTTCCGCAAGAAGGCCAGGGTAGTCATCACCC
AGAGCCCTGGCAAGTATGTCCTTCCTCCACCCAAACTAAATATTGAAATGCCAGACTAA

Translation (322 aa):
MNLRGLFQDFNPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASVGTGVWARNPQ
YRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLFFVSPVSVAACVWGFRHDRSL
EVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFEILLVHKLDGH
NAFSCIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRKDFCQFLLEIFPFLREYGNISYDLHHEDSEETE
ETPVPEPPKIAPMFRKKARVVITQSPGKYVLPPPKLNIEMPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH