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Report for CCDS2945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2945.1 Public Homo sapiens 3 NXPE3 24 110 108 CCDS HistoryNCBI Gene:91775Re-query CCDS DB by CCDS ID:2945.1Re-query CCDS DB by GeneID:91775See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2945.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273347.10 ENSP00000273347.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273347.10Link to Ensembl Protein Viewer:ENSP00000273347.5Re-query CCDS DB by Nucleotide ID:ENST00000273347Re-query CCDS DB by Protein ID:ENSP00000273347
Original member Current member EBI ENST00000491511.6 ENSP00000417485.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000491511.6Link to Ensembl Protein Viewer:ENSP00000417485.1Re-query CCDS DB by Nucleotide ID:ENST00000491511Re-query CCDS DB by Protein ID:ENSP00000417485
Original member Current member EBI ENST00000477909.5 ENSP00000418369.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000477909.5Link to Ensembl Protein Viewer:ENSP00000418369.1Re-query CCDS DB by Nucleotide ID:ENST00000477909Re-query CCDS DB by Protein ID:ENSP00000418369
Original member Current member EBI ENST00000495842.6 ENSP00000418381.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000495842.6Link to Ensembl Protein Viewer:ENSP00000418381.2Re-query CCDS DB by Nucleotide ID:ENST00000495842Re-query CCDS DB by Protein ID:ENSP00000418381
Original member Current member EBI ENST00000474165.6 ENSP00000419667.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000474165.6Link to Ensembl Protein Viewer:ENSP00000419667.2Re-query CCDS DB by Nucleotide ID:ENST00000474165Re-query CCDS DB by Protein ID:ENSP00000419667
Original member Current member EBI ENST00000704530.1 ENSP00000515919.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704530.1Link to Ensembl Protein Viewer:ENSP00000515919.1Re-query CCDS DB by Nucleotide ID:ENST00000704530Re-query CCDS DB by Protein ID:ENSP00000515919
Original member Current member EBI ENST00000704532.1 ENSP00000515920.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704532.1Link to Ensembl Protein Viewer:ENSP00000515920.1Re-query CCDS DB by Nucleotide ID:ENST00000704532Re-query CCDS DB by Protein ID:ENSP00000515920
Original member Current member EBI ENST00000704539.1 ENSP00000515927.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704539.1Link to Ensembl Protein Viewer:ENSP00000515927.1Re-query CCDS DB by Nucleotide ID:ENST00000704539Re-query CCDS DB by Protein ID:ENSP00000515927
Original member Current member EBI ENST00000487830.2 ENSP00000515931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487830.2Link to Ensembl Protein Viewer:ENSP00000515931.1Re-query CCDS DB by Nucleotide ID:ENST00000487830Re-query CCDS DB by Protein ID:ENSP00000515931
Original member Current member EBI ENST00000704551.1 ENSP00000515939.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704551.1Link to Ensembl Protein Viewer:ENSP00000515939.1Re-query CCDS DB by Nucleotide ID:ENST00000704551Re-query CCDS DB by Protein ID:ENSP00000515939
Original member Current member EBI ENST00000704552.1 ENSP00000515940.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704552.1Link to Ensembl Protein Viewer:ENSP00000515940.1Re-query CCDS DB by Nucleotide ID:ENST00000704552Re-query CCDS DB by Protein ID:ENSP00000515940
Original member Current member NCBI NM_001134456.2 NP_001127928.1 Accepted alive Link to Nucleotide Sequence:NM_001134456.2Link to Protein Sequence:NP_001127928.1Re-query CCDS DB by Nucleotide ID:NM_001134456Re-query CCDS DB by Protein ID:NP_001127928Link to BLAST:NP_001127928.1
Original member Current member NCBI NM_001348990.2 NP_001335919.1 Accepted alive Link to Nucleotide Sequence:NM_001348990.2Link to Protein Sequence:NP_001335919.1Re-query CCDS DB by Nucleotide ID:NM_001348990Re-query CCDS DB by Protein ID:NP_001335919Link to BLAST:NP_001335919.1
Original member Current member NCBI NM_001348991.2 NP_001335920.1 Accepted alive Link to Nucleotide Sequence:NM_001348991.2Link to Protein Sequence:NP_001335920.1Re-query CCDS DB by Nucleotide ID:NM_001348991Re-query CCDS DB by Protein ID:NP_001335920Link to BLAST:NP_001335920.1
Original member Current member NCBI NM_001348992.2 NP_001335921.1 Accepted alive Link to Nucleotide Sequence:NM_001348992.2Link to Protein Sequence:NP_001335921.1Re-query CCDS DB by Nucleotide ID:NM_001348992Re-query CCDS DB by Protein ID:NP_001335921Link to BLAST:NP_001335921.1
Original member Current member NCBI NM_001348993.2 NP_001335922.1 Accepted alive Link to Nucleotide Sequence:NM_001348993.2Link to Protein Sequence:NP_001335922.1Re-query CCDS DB by Nucleotide ID:NM_001348993Re-query CCDS DB by Protein ID:NP_001335922Link to BLAST:NP_001335922.1
Original member Current member NCBI NM_001348994.2 NP_001335923.1 Accepted alive Link to Nucleotide Sequence:NM_001348994.2Link to Protein Sequence:NP_001335923.1Re-query CCDS DB by Nucleotide ID:NM_001348994Re-query CCDS DB by Protein ID:NP_001335923Link to BLAST:NP_001335923.1
Original member Current member NCBI NM_001348995.2 NP_001335924.1 Accepted alive Link to Nucleotide Sequence:NM_001348995.2Link to Protein Sequence:NP_001335924.1Re-query CCDS DB by Nucleotide ID:NM_001348995Re-query CCDS DB by Protein ID:NP_001335924Link to BLAST:NP_001335924.1
Original member Current member NCBI NM_145037.4 NP_659474.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145037.4Link to Protein Sequence:NP_659474.1Re-query CCDS DB by Nucleotide ID:NM_145037Re-query CCDS DB by Protein ID:NP_659474Link to BLAST:NP_659474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127928.1 559 Q969Y0 559 100% 0 0
NP_001335919.1 559 Q969Y0 559 100% 0 0
NP_001335920.1 559 Q969Y0 559 100% 0 0
NP_001335921.1 559 Q969Y0 559 100% 0 0
NP_001335922.1 559 Q969Y0 559 100% 0 0
NP_001335923.1 559 Q969Y0 559 100% 0 0
NP_001335924.1 559 Q969Y0 559 100% 0 0
NP_659474.1 559 Q969Y0 559 100% 0 0

Chromosomal Locations for CCDS 2945.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101785597 101785689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101801235 101801989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101807053 101807126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101816795 101817001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101821404 101821954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTGGTGCTGG
TCATCAATGTTACTCAGGTAGAGTACTTGGACCATGAGACTGTTTCAGCCACTTTCATCGACAGCAGTGG
ACAGTTTGTTTCCTCCCAGGTGACAGGAATTAGCCGAAATCCCTACTGTGGCTATGATCAGCAGACCCTG
TCCAGCCAGGAGCGCATGGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCC
CAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCAGCTACTTTGTCATCTTGAACTCTGCTGCCTTCTT
TAAGGTGGGAAGCCAGCTTGAGGTGCTGGTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAGTATGGT
GGAGACTACCTGCAGGCCAGAATTCACTCCCTCAAGCTGCAGGCTGGGGCTGTGGGCAGGGTGGTGGATT
ACCAGAATGGGTTTTACAAGGTTTTCTTTACTTTGCTATGGCCAGGCAAAGTTAAAGTATCCGTATCTCT
GGTCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGATAAACCAGACAGGGTCTATTTC
AAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGGGAATCTGC
CCCTGTGTAACTTTACAGACCTCTACACTGGGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTG
CAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGCTGCAGAGAGTGCTTTC
TTCCAGAGTGGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGACCTGATTGGGTAACTGTGATTCCCA
GGAGAATAAAAGAAACTAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTTTCCTTCTGGGTATTATTA
TAAAGACCAGTGGAGGCCCAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGACAACATTACAGAGTGC
TTACAAAGAAAAGTGGTGCATTTATTTGGTGACTCAACAATCAGGCAATGGTTTGAATACCTTACTACAT
TTGTTCCAGATTTAGTGGAGTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCA
GAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAAT
GAGCTCCATTATGTGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGAACACAGTGGTTGCCATAGCTG
TATGGTCTCACTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAGCAGT
GGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGA
CCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAGGATGTTCT
CAGGGGTTGGAGTATATCTCGTCGATGCCTGGGAGATGACCCTGGCCCATTATCTACCGCACAAGCTGCA
TCCAGATGAAGTTATTGTGAAGAACCAGCTGGACATGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAG

Translation (559 aa):
MWTNFFKLRLFCCLLAVLMVVVLVINVTQVEYLDHETVSATFIDSSGQFVSSQVTGISRNPYCGYDQQTL
SSQERMEEDSLLAALHRQVPDVGPVPFVKSTDPSSSYFVILNSAAFFKVGSQLEVLVHVQDFQRKPKKYG
GDYLQARIHSLKLQAGAVGRVVDYQNGFYKVFFTLLWPGKVKVSVSLVHPSEGIRVLQRLQEDKPDRVYF
KSLFRSGRISETTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHFKGGYLKGLLTAAESAF
FQSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDPDNITEC
LQRKVVHLFGDSTIRQWFEYLTTFVPDLVEFNLGSPKNVGPFLAVDQKHNILLKYRCHGPPIRFTTVFSN
ELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNIRRAVVRLLDRSPKTVVVIRTANAQELG
PEVSLFNSDWYNFQLDTILRRMFSGVGVYLVDAWEMTLAHYLPHKLHPDEVIVKNQLDMFLSFVCPLET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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