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Report for CCDS28778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28778.1 Public Mus musculus 17 Olfr135 16 104 75 CCDS HistoryNCBI Gene:258329Re-query CCDS DB by CCDS ID:28778.1Re-query CCDS DB by GeneID:258329

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 28778.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000076245 ENSMUSP00000075595 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076245Link to Ensembl Protein Viewer:ENSMUSP00000075595Re-query CCDS DB by Nucleotide ID:ENSMUST00000076245Re-query CCDS DB by Protein ID:ENSMUSP00000075595
Original member Current member EBI,WTSI OTTMUST00000096399 OTTMUSP00000053853 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000096399Link to Vega Protein Viewer:OTTMUSP00000053853Re-query CCDS DB by Nucleotide ID:OTTMUST00000096399Re-query CCDS DB by Protein ID:OTTMUSP00000053853
Original member Current member NCBI NM_146332.1 NP_666444.1 Accepted alive Link to Nucleotide Sequence:NM_146332.1Link to Protein Sequence:NP_666444.1Re-query CCDS DB by Nucleotide ID:NM_146332Re-query CCDS DB by Protein ID:NP_666444Link to BLink:NP_666444.1

Chromosomal Locations for CCDS 28778.1

Assembly GRCm38.p2 (GCF_000001635.22)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 17Link to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17Link to Vega Genome Browser on chromosome 17

Chromosome Start Stop Links
17 38208247 38209185 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17Link to Vega Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGATATTGGTCAATAAAAGTCACCCAGAAGAGTTTATTCTACTTGGTTTTGCAGATCGTCCTTGGCTGG
AA
CTTCCTCTCTTTATTATTCTTCTGGTAACATACCCCACAGCCATGATTGGAAACATCGCCATCATTCT
C
ATGTCTATATTAGACCCCTGTCTCCACAGCCCCATGTATTTCTTTCTCACCAACCTCTCCTTTCTGGAC
ATG
TGCTACACCACAAGCATTGTACCTCAGATGTTAATTAACCTTTGGGGCTCTACAAAGACCATCAGCT
AC
TTGAGGTGTGTAGTTCAGCTTTATTTCTTCCACACAATGGGAGGTACAGAGTGTGTCCTCCTAGCTCT
T
ATGTCCTTTGACCGATATGTGGCCATCTGCAAACCCCTGCACTATACCCTCATAATGAATCGGCGTAAC
TGC
CTCCTGTTAGTGTCCACTGTGTGGCTGACTGGAATTTCCTATGCTGTCTCAGAGGCCACTGTAACAC
TG
CAATTGCCTCTATGTGGCCACAATAAAATGGATCATTTAGTGTGTGAGATTCCAATTCTGATAAAAAC
T
GCTTGTGGTGAAAAAGAGACTAATGAGCTTGCTCTCTCTGTAATATGCATTTTTCTTTTAGCTGTCCCT
CTG
TGTTTAATTCTTGCCTCCTATGCTAGTATTGGACATGCTGTCTTTAAAATCAAATCAATAGAAGGAA
GG
AAAAAGGCTTTTGGGACATGTTCCTCTCATCTCATTGTAGTTCTCTTGTTCTATGGCCCAGGTATTAG
T
ATGTATCTTCAGCCTCCCTCCTCTATTACAAAAGACCAACCTAAGTTCATGGCTCTCTTCTATGGAGTA
GTC
ACTCCTACACTGAACCCCTTCATTTATACTCTGAGAAATAAGGATGTTAAGGGGGCATTAGGTAACC
TA
TTCAGAAACATTTTTATTCCGAAGTGA


Translation (312 aa):
MILVNKSHPEEFILLGFADRPWLELPLFIILLVTYPTAMIGNIAIILMSILDPCLHSPMYFFLTNLSFLD
M
CYTTSIVPQMLINLWGSTKTISYLRCVVQLYFFHTMGGTECVLLALMSFDRYVAICKPLHYTLIMNRRN
C
LLLVSTVWLTGISYAVSEATVTLQLPLCGHNKMDHLVCEIPILIKTACGEKETNELALSVICIFLLAVP
L
CLILASYASIGHAVFKIKSIEGRKKAFGTCSSHLIVVLLFYGPGISMYLQPPSSITKDQPKFMALFYGV
V
TPTLNPFIYTLRNKDVKGALGNLFRNIFIPK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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