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Report for CCDS26984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26984.1 Public Mus musculus 14 Gch1 16 104 75 CCDS HistoryNCBI Gene:14528Re-query CCDS DB by CCDS ID:26984.1Re-query CCDS DB by GeneID:14528

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 26984.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000089959 ENSMUSP00000087405 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089959Link to Ensembl Protein Viewer:ENSMUSP00000087405Re-query CCDS DB by Nucleotide ID:ENSMUST00000089959Re-query CCDS DB by Protein ID:ENSMUSP00000087405
Original member Current member NCBI NM_008102.3 NP_032128.1 Accepted alive Link to Nucleotide Sequence:NM_008102.3Link to Protein Sequence:NP_032128.1Re-query CCDS DB by Nucleotide ID:NM_008102Re-query CCDS DB by Protein ID:NP_032128Link to BLink:NP_032128.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032128.1 241 Q05915 241 100% 0 0

Chromosomal Locations for CCDS 26984.1

Assembly GRCm38.p2 (GCF_000001635.22)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 14Link to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

Chromosome Start Stop Links
14 47155798 47155924 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47157409 47157493 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47158863 47158894 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47166476 47166531 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47169212 47169321 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47188952 47189267 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGAGAAGCCGCGGGGAGTCAGGTGCACCAATGGGTTCTCCGAGCGGGAGCTGCCGCGGCCCGGGGCCA
GC
CCGCCTGCCGAGAAGTCCCGGCCGCCCGAGGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGG
G
CGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGGCGGCCGCTTACTCGTCCATTCTG
CTC
TCGCTGGGCGAGGACCCCCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGC
AG
TACTTCACCAAGGGATACCAGGAGACCATCTCAGATGTCCTGAATGATGCTATATTTGATGAAGATCA
T
GACGAGATGGTGATTGTGAAGGACATAGATATGTTCTCCATGTGTGAGCATCACCTTGTTCCATTTGTA
GGA
AGGGTCCATATTGGCTATCTTCCTAACAAGCAAGTCCTTGGTCTCAGTAAACTTGCCAGGATTGTAG
AA
ATCTACAGTAGACGACTACAAGTTCAAGAGCGCCTCACCAAACAGATTGCGGTGGCCATCACAGAAGC
C
TTGCAGCCTGCTGGCGTTGGAGTAGTGATTGAAGCGACACACATGTGCATGGTAATGCGAGGCGTGCAG
AAA
ATGAACAGCAAGACTGTCACTAGCACCATGCTGGGCGTGTTCCGGGAAGACCCCAAGACTCGGGAGG
AG
TTCCTCACACTAATCAGGAGCTGA


Translation (241 aa):
MEKPRGVRCTNGFSERELPRPGASPPAEKSRPPEAKGAQPADAWKAGRHRSEEENQVNLPKLAAAYSSIL
L
SLGEDPQRQGLLKTPWRAATAMQYFTKGYQETIS
DVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFV
G
R
VHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRGVQ
K
MNSKTVTSTMLGVFREDPKTREEFLTLIRS




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