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Report for CCDS26844.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26844.1 Public Mus musculus 14 Dnajc9 23 108 98 CCDS HistoryNCBI Gene:108671Re-query CCDS DB by CCDS ID:26844.1Re-query CCDS DB by GeneID:108671See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26844.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022345.6 ENSMUSP00000022345.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022345.6Link to Ensembl Protein Viewer:ENSMUSP00000022345.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022345Re-query CCDS DB by Protein ID:ENSMUSP00000022345
Original member NCBI NM_134081.5 NP_598842.1 Updated not alive Link to Nucleotide Sequence:NM_134081.5Link to Protein Sequence:NP_598842.1Re-query CCDS DB by Nucleotide ID:NM_134081Re-query CCDS DB by Protein ID:NP_598842
Current member NCBI NM_134081.6 NP_598842.1 Accepted alive Link to Nucleotide Sequence:NM_134081.6Link to Protein Sequence:NP_598842.1Re-query CCDS DB by Nucleotide ID:NM_134081Re-query CCDS DB by Protein ID:NP_598842Link to BLAST:NP_598842.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598842.1 259 Q91WN1 259 100% 0 0

Chromosomal Locations for CCDS 26844.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20385362 20385478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20385800 20385886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20387957 20388211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20388300 20388440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20388604 20388783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGGGCTGCTGGAGCTGTGCGAGCAGGTGTTTGGCACCGCCGACCTCTACCAAGTGCTGGGCGTGCGGC
GCGAGGCTTCGGACGGCGAGGTCCGACGCGGCTACCACAAAGTGTCCCTGCAAGTGCACCCCGACCGAGT
AGAGGAGGACCAGAAAGAGGACGCCACCCGCCGCTTCCAGATCTTGGGAAGAGTCTACGCGGTTCTGAGT
GACAAGGAACAGAAAGCAGTGTACGATGAACAGGGGACAGTGGACGAAGACTCTGCTGGCCTCAACCAAG
ACCGGGACTGGGATGCATATTGGAGATTACTCTTTAAAAAGATATCGCTAGAGGATATCCAAGCTTTTGA
AAAGACATACAAAGGCTCCGAAGAAGAGCTAAACGATATTAAGCAGGCCTATCTGGACTTCAAGGGCGAC
ATGGACCAGATCATGGAGTCTGTACTTTGTGTACAGTACACAGATGAACCCAGGATAAGAAACATCATTC
AAAAAGCTATTGAATCCAAAGAGATTCCAGCCTACAGCGCCTTCGTCAAAGAGTCTAAACAAAAGATGAA
TGCAAGGAAAAGGAGGGCTCAGGAAGAGGCTAAAGAAGCAGAGTTGAGCAGAAAGGAGCTGGGACTGGAA
GAAGGAGTGGATAACTTGAAAGCACTCATCCAGAGCAGACAAAAGGATCGGCAAAAGGAAATGGACAGTT
TTCTGGCTCAAATGGAAGCAAAATACTGCAAACCTTCCAAAGGAGGGAAAAGAACAGCACTCAAGAAGGA
AAAGAAATGA

Translation (259 aa):
MGLLELCEQVFGTADLYQVLGVRREASDGEVRRGYHKVSLQVHPDRVEEDQKEDATRRFQILGRVYAVLS
DKEQKAVYDEQGTVDEDSAGLNQDRDWDAYWRLLFKKISLEDIQAFEKTYKGSEEELNDIKQAYLDFKGD
MDQIMESVLCVQYTDEPRIRNIIQKAIESKEIPAYSAFVKESKQKMNARKRRAQEEAKEAELSRKELGLE
EGVDNLKALIQSRQKDRQKEMDSFLAQMEAKYCKPSKGGKRTALKKEKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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