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Report for CCDS2532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2532.1 Public Homo sapiens 2 COPS9 24 110 108 CCDS HistoryNCBI Gene:150678Re-query CCDS DB by CCDS ID:2532.1Re-query CCDS DB by GeneID:150678See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2532.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307266.7 ENSP00000304147.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307266.7Link to Ensembl Protein Viewer:ENSP00000304147.3Re-query CCDS DB by Nucleotide ID:ENST00000307266Re-query CCDS DB by Protein ID:ENSP00000304147
Original member Current member NCBI NM_138336.1 NP_612209.1 Accepted alive Link to Nucleotide Sequence:NM_138336.1Link to Protein Sequence:NP_612209.1Re-query CCDS DB by Nucleotide ID:NM_138336Re-query CCDS DB by Protein ID:NP_612209Link to BLAST:NP_612209.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612209.1 252 Q8WXC6-1 252 100% 0 0

Chromosomal Locations for CCDS 2532.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 240126563 240126940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240129911 240130028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240131055 240131088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240133933 240134005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240136192 240136347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGTGGCGCGCGCCGGAAGCGGCTCTGAGGCCGGAAGTGAGCCTAGAGCGCCGCGGCCCCGAGATGAAGC
CGGCGGTGGACGAGATGTTCCCCGAGGGCGCCGGGCCCTACGTGGACCTGGACGAGGTGGCACGGGCCCG
GCGGGAGTCTCCGAGCGCGGGAGGCAGCACCGGGCTCTTGATGGACTTGGCAGCCAATGAAAAGGCCGTT
CATGCAGACTTTTTTAACGATTTTGAAGATCTTTTTGATGATGATGACATCCACAGCTCAGGACTGCCCA
GGACAAGCCAGCAGTCCTCCATGGTTCCCGCACTGCAGCGAGGGCAGTCGGAGCACGGGGTCCGTGGGAA
GGCAGCAGAGCGGCCTGTGGTGTCGGAAGAGAGATGTGAACTGAACGGGAGAGAAGTGGCAGCTTTGGAC
AGAGCGTTTGGGAGCACAGGCCATGGGCAGGGGGCGGAGGCGCTAATGTTTACCAGATGCAGAGAACATC
CGCTGTGTGGCACCAACAAAGCAACAAGTGAGGGGAAAATGGGCACAGGACGCTTAAGAAACAGTTTACG
GAAGAACCAATCCAAGTGGCTGGGAAGTTATCTAGAGGTGCTCAGAACCACAAGAAGCAGGCGAGAGGTC
AGCGAAGACAGCACAATATCAGTTTCTACTCACTGGAGGGGTAAATGTTTTAAGAGTGATGAAACACCAT
CCGTTGCTGGTGGAGAAGAAGGGAAGAAGACCACACAGCCATGCATAGATGTGAGGTAG

Translation (252 aa):
MWRAPEAALRPEVSLERRGPEMKPAVDEMFPEGAGPYVDLDEVARARRESPSAGGSTGLLMDLAANEKAV
HADFFNDFEDLFDDDDIHSSGLPRTSQQSSMVPALQRGQSEHGVRGKAAERPVVSEERCELNGREVAALD
RAFGSTGHGQGAEALMFTRCREHPLCGTNKATSEGKMGTGRLRNSLRKNQSKWLGSYLEVLRTTRSRREV
SEDSTISVSTHWRGKCFKSDETPSVAGGEEGKKTTQPCIDVR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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