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Report for CCDS24213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24213.1 Public Mus musculus 10 Kics2 23 108 98 CCDS HistoryNCBI Gene:270802Re-query CCDS DB by CCDS ID:24213.1Re-query CCDS DB by GeneID:270802See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24213.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065600.7 ENSMUSP00000070834.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065600.7Link to Ensembl Protein Viewer:ENSMUSP00000070834.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000065600Re-query CCDS DB by Protein ID:ENSMUSP00000070834
Original member Current member NCBI NM_173022.3 NP_766610.2 Accepted alive Link to Nucleotide Sequence:NM_173022.3Link to Protein Sequence:NP_766610.2Re-query CCDS DB by Nucleotide ID:NM_173022Re-query CCDS DB by Protein ID:NP_766610Link to BLAST:NP_766610.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766610.2 445 Q6P1I3-1 445 100% 0 0

Chromosomal Locations for CCDS 24213.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121739976 121740210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121745331 121745616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121750303 121751119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGGGGGAGTCTATCCCGCTAGCCGCCCCGGTGCCGGTGGAACAGGCGGTGCTGGAGACGTTCTTCTCTC
ACCTGGGTATCTTCTCTTACGACAAGGCCAAGGACAATGTGGAGAAGGAACGAGAGGCCAACAAGAGCGC
GGGGGGCAGCTGGCTGTCGCTGCTGGCGGCCTTGGCGCACCTGGCCGCGGCTGAGAAGGTCTATCACAGC
CTCACCTACCTGGGGCAGAAACTAGGGGGCCAGTCATTCTTCAGCAGGAAAGACTCCATCCGCACCATCT
ACACTTCCCTGCATAACGAACTGAAGAAAGTGGTGGCCGGCCGCGGCGCCCCGGGCGGAACGGCTCCTCA
CGTGGAGGAGCTTCTCCCCCACCTGTCAGAGCAGCTCTGTTTCTTTGTTCAGGCTCGGATGGAGATCGCA
GACTTCTACGAGAAGATGTACGCCCTCAGCACACAGAAGTTCATCAACACAGAAGAGCTGGTCAGCACCT
TGGATACCATCCTCAGGAAGTACAGCTCCAGATTTCACCACCCCATCCTCAGCCCTCTGGAGAGCAGTTT
CCAGCTGGAAGTGGGCGTGCTGAGTCATCTCCTCAAGGCGCAGGCGCAGATCTCGGAGTGGAAGTTCCTC
CCGTCCCTGGTTACCTTGCACAACGCTCACACGAAGCTTCAGAGCTGGGGCCAGACCTTTGAGAAGCAGC
GGGAGACCAAGAAGCACCTGTTCGGAGGACAGTCTCAGAAGGCCGTGCAGCCGCCACACCTTTTCCTCTG
GCTGATGAAACTCAAGACCATGCTCTTGGCCAAGTTCAGCTTTTACTTCCACGAGGCGCTGAGCCGACAG
ACGACCGCGTCCGAAATGAAAGCGCTGACGGCCAAGGCCAACCCGGACCTCTTTGGAAAGATCTCCAGTT
TTATCAGGAAATACGACGCTGCCAACGTCTCCTTAATTTTTGACAACCGGGGCTCAGAGAGCTTTCAGGG
TCATGGCTACCACCACCCACATTCCTACCGAGAGGCCCCCAAGGGAGTGGACCAGTACCCAGCCGTGGTG
TCTCTGCCCAGTGACAGGCCCGTCATGCACTGGCCCAATGTTATCATGATCATGACAGACCGAGCATCTG
ACCTGAACAGCTTGGAGAAAGTGGTCCACTTCTACGACGACAAAGTCCAGAGCACCTACTTCCTGACCCG
CCCGGAACCCCACTTCACCATCGTCGTCATTTTTGAGTCAAAGAAATCTGAGAGAGACTCCCATTTTATT
TCCTTCCTCAACGAGCTCTCGCTTGCCCTTAAGAACCCCAAAGTGTTTGCAAGTCTGAAGCCTGGATCCA
AAGGTTAG

Translation (445 aa):
MGESIPLAAPVPVEQAVLETFFSHLGIFSYDKAKDNVEKEREANKSAGGSWLSLLAALAHLAAAEKVYHS
LTYLGQKLGGQSFFSRKDSIRTIYTSLHNELKKVVAGRGAPGGTAPHVEELLPHLSEQLCFFVQARMEIA
DFYEKMYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSPLESSFQLEVGVLSHLLKAQAQISEWKFL
PSLVTLHNAHTKLQSWGQTFEKQRETKKHLFGGQSQKAVQPPHLFLWLMKLKTMLLAKFSFYFHEALSRQ
TTASEMKALTAKANPDLFGKISSFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVV
SLPSDRPVMHWPNVIMIMTDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFI
SFLNELSLALKNPKVFASLKPGSKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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