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Report for CCDS2421.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2421.1 Public Homo sapiens 2 STK36 24 110 108 CCDS HistoryNCBI Gene:27148Re-query CCDS DB by CCDS ID:2421.1Re-query CCDS DB by GeneID:27148See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2421.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295709.8 ENSP00000295709.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295709.8Link to Ensembl Protein Viewer:ENSP00000295709.3Re-query CCDS DB by Nucleotide ID:ENST00000295709Re-query CCDS DB by Protein ID:ENSP00000295709
Original member Current member EBI ENST00000440309.5 ENSP00000394095.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440309.5Link to Ensembl Protein Viewer:ENSP00000394095.1Re-query CCDS DB by Nucleotide ID:ENST00000440309Re-query CCDS DB by Protein ID:ENSP00000394095
Original member Current member NCBI NM_001369423.1 NP_001356352.1 Accepted alive Link to Nucleotide Sequence:NM_001369423.1Link to Protein Sequence:NP_001356352.1Re-query CCDS DB by Nucleotide ID:NM_001369423Re-query CCDS DB by Protein ID:NP_001356352Link to BLAST:NP_001356352.1
Original member Current member NCBI NM_015690.5 NP_056505.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015690.5Link to Protein Sequence:NP_056505.2Re-query CCDS DB by Nucleotide ID:NM_015690Re-query CCDS DB by Protein ID:NP_056505Link to BLAST:NP_056505.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356352.1 1315 Q9NRP7-1 1315 100% 0 0
NP_056505.2 1315 Q9NRP7-1 1315 100% 0 0

Chromosomal Locations for CCDS 2421.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218672830 218672913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218673625 218673765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218673879 218673956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218675343 218675473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218676029 218676278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218679168 218679261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218679560 218679729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218679893 218680080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218680603 218680702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218685085 218685228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218688697 218688876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218689859 218689956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218690450 218690555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218692143 218692293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218692583 218692710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218693240 218693344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218693723 218693821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218693895 218693983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218694264 218694327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218694525 218694635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218696527 218696601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218697039 218697213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218697463 218697610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218697854 218698001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218698602 218699348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218701866 218702009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3948 nt):
ATGGAAAAGTACCACGTGTTGGAGATGATTGGAGAAGGCTCTTTTGGGAGGGTGTACAAGGGTCGAAGAA
AATACAGTGCTCAGGTCGTGGCCCTGAAGTTCATCCCAAAATTGGGGCGCTCAGAGAAGGAGCTGAGGAA
TTTGCAACGAGAGATTGAAATAATGCGGGGTCTGCGGCATCCCAACATTGTGCATATGCTTGACAGCTTT
GAAACTGATAAAGAGGTGGTGGTGGTGACAGACTATGCTGAGGGAGAGCTCTTTCAGATCCTAGAAGATG
ACGGAAAACTTCCTGAAGACCAGGTTCAGGCCATTGCTGCCCAGTTGGTGTCAGCCCTGTACTATCTGCA
TTCCCACCGCATCCTACACCGAGATATGAAGCCTCAGAACATCCTCCTCGCCAAGGGTGGTGGCATCAAG
CTCTGTGACTTTGGATTTGCCCGGGCTATGAGCACCAATACAATGGTGCTGACATCCATCAAAGGCACAC
CACTCTATATGTCTCCAGAGCTGGTGGAGGAGCGACCATACGACCACACAGCGGACCTCTGGTCTGTTGG
CTGCATACTATATGAACTGGCAGTAGGCACCCCTCCCTTCTATGCTACAAGCATCTTTCAGCTGGTCAGC
CTCATTCTCAAGGACCCTGTGCGCTGGCCCTCAACCATCAGTCCCTGCTTTAAGAACTTCCTGCAGGGAC
TGCTCACCAAAGACCCACGGCAGCGACTGTCCTGGCCAGACCTCTTATATCACCCCTTTATTGCTGGTCA
TGTCACCATAATAACTGAGCCAGCAGGCCCAGATTTGGGGACCCCATTCACCAGCCGCCTACCCCCAGAA
CTTCAGGTCCTAAAGGACGAACAGGCCCATCGGTTGGCCCCCAAGGGTAATCAGTCTCGCATCTTGACTC
AGGCCTATAAACGCATGGCTGAGGAGGCCATGCAGAAGAAACATCAGAACACAGGACCTGCCCTTGAGCA
AGAGGACAAGACCAGCAAGGTGGCTCCTGGCACAGCCCCTCTGCCCAGACTCGGGGCCACTCCTCAGGAA
TCAAGCCTCCTGGCCGGGATCTTAGCCTCAGAATTGAAGAGCAGCTGGGCTAAATCAGGGACTGGAGAGG
TGCCCTCTGCACCTCGGGAAAACCGGACCACCCCAGATTGTGAACGAGCATTCCCAGAGGAGAGGCCAGA
GGTGCTGGGCCAGCGGAGCACTGATGTAGTGGACCTGGAAAATGAGGAGCCAGACAGTGACAATGAGTGG
CAGCACCTGCTAGAGACCACTGAGCCTGTGCCTATTCAACTGAAGGCTCCTCTCACCTTGCTGTGTAATC
CTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCATGAAGCTGGAGGGCAGATCCTGAAAGGCATCTTGGA
GGGTGCTTCCCACATCCTGCCTGCATTCCGGGTCCTGAGCAGTCTTCTCTCCAGCTGCAGTGATTCTGTT
GCCTTGTATTCCTTCTGCCGGGAGGCAGGGCTTCCTGGGCTGCTGCTGAGTCTACTCAGGCACAGTCAGG
AGAGCAACAGCCTCCAGCAGCAATCTTGGTATGGGACCTTCTTACAGGACCTGATGGCTGTGATTCAGGC
CTACTTTGCCTGTACCTTCAATCTGGAGAGGAGCCAGACAAGTGACAGCCTGCAGGTGTTTCAGGAGGCT
GCCAACCTTTTTCTGGACCTGTTGGGGAAACTGCTGGCCCAACCAGATGACTCTGAGCAGACTTTGCGGA
GGGACAGCCTTATGTGCTTTACTGTCCTGTGCGAAGCCATGGATGGGAACAGCCGGGCCATCTCCAAAGC
CTTTTACTCCAGCTTGCTGACGACACAGCAGGTTGTCTTGGATGGGCTCCTTCATGGCTTGACAGTTCCA
CAGCTCCCTGTCCACACTCCCCAAGGAGCCCCGCAAGTGAGCCAGCCACTGCGAGAGCAGAGTGAGGATA
TACCTGGAGCCATTTCCTCTGCCCTGGCAGCCATATGCACTGCTCCTGTGGGACTGCCCGACTGCTGGGA
TGCCAAGGAGCAGGTCTGTTGGCATTTGGCAAATCAGCTAACTGAAGACAGCAGCCAGCTCAGGCCATCC
CTCATCTCTGGCCTGCAGCATCCCATCCTGTGCCTGCACCTTCTCAAGGTTCTATACTCCTGCTGCCTTG
TCAGTGAGGGCCTGTGCCGTCTTCTGGGGCAGGAGCCCCTGGCCTTGGAATCCCTGTTTATGTTGATTCA
GGGCAAGGTAAAAGTAGTAGATTGGGAAGAGTCTACTGAAGTGACACTCTACTTCCTCTCCCTTCTTGTC
TTTCGGCTCCAAAACCTGCCTTGTGGAATGGAGAAGCTAGGCAGTGACGTTGCTACTCTCTTTACCCATT
CGCATGTCGTCTCTCTTGTGAGTGCAGCAGCCTGTCTATTGGGACAGCTTGGTCAGCAAGGGGTGACCTT
TGACCTCCAGCCCATGGAATGGATGGCTGCAGCCACACATGCCTTGTCTGCCCCTGCAGAGGTTCGGTTG
ACTCCACCAGGTAGTTGTGGATTCTATGATGGCCTCCTTATCCTTCTGTTGCAGCTCCTCACTGAGCAGG
GGAAGGCTAGCCTAATCAGGGATATGTCCAGTTCAGAAATGTGGACCGTTTTGTGGCACCGCTTCTCCAT
GGTCCTGAGGCTCCCCGAGGAGGCATCTGCACAGGAAGGGGAGCTTTCGCTATCCAGTCCACCAAGCCCT
GAGCCAGACTGGACACTGATTTCTCCCCAGGGCATGGCAGCCCTGCTGAGCCTGGCCATGGCCACCTTTA
CCCAGGAGCCCCAGTTATGCCTGAGCTGCCTGTCCCAGCATGGAAGTATCCTCATGTCCATCCTGAAGCA
TCTGCTTTGCCCCAGCTTCCTGAATCAACTGCGCCAGGCGCCTCATGGGTCTGAGTTTCTCCCTGTCGTG
GTGCTCTCTGTCTGCCAGCTCCTTTGCTTCCCCTTTGCGCTGGACATGGATGCTGACCTCCTTATAGGTG
TCTTGGCCGACCTCAGGGACTCAGAAGTTGCAGCCCATCTGCTGCAGGTCTGCTGCTACCATCTTCCGTT
GATGCAAGTGGAGCTGCCCATCAGCCTTCTCACACGCCTGGCCCTCATGGATCCCACCTCTCTCAACCAG
TTTGTGAACACAGTGTCTGCCTCCCCTAGAACCATCGTCTCGTTTCTCTCAGTTGCCCTCCTGAGTGACC
AGCCACTGTTGACCTCCGACCTTCTCTCTCTGCTGGCCCATACTGCCAGGGTCCTGTCTCCCAGCCACTT
GTCCTTTATCCAAGAGCTTCTGGCTGGCTCTGATGAATCCTATCGGCCCCTGCGCAGCCTCCTGGGCCAC
CCAGAGAATTCTGTGCGGGCACACACTTATAGGCTCCTGGGACACTTGCTCCAACACAGCATGGCCCTGC
GTGGGGCACTGCAGAGCCAGTCTGGACTGCTCAGCCTTCTGCTGCTTGGGCTTGGAGACAAGGATCCTGT
TGTGCGGTGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGTCCTCTGGGACCTGCCCTG
GCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATCCTCAGGCTGGTATCCGGCGCAATGTTGCAT
CAGCTCTGGGCAACTTGGGACCTGAAGGTTTGGGAGAGGAGCTGTTACAGTGCGAAGTACCCCAGCGGCT
CCTAGAAATGGCATGTGGAGACCCCCAGCCAAATGTGAAGGAGGCTGCCCTCATTGCCCTCCGGAGCCTG
CAACAGGAGCCTGGCATCCATCAGGTACTGGTGTCCCTGGGTGCCAGTGAGAAACTATCCTTGCTCTCTC
TGGGGAATCAGTCACTGCCACACAGCAGTCCTAGGCCTGCCTCTGCCAAACACTGCAGGAAACTCATTCA
CCTCCTGAGGCCAGCCCATAGCATGTGA

Translation (1315 aa):
MEKYHVLEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLRHPNIVHMLDSF
ETDKEVVVVTDYAEGELFQILEDDGKLPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQNILLAKGGGIK
LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCILYELAVGTPPFYATSIFQLVS
LILKDPVRWPSTISPCFKNFLQGLLTKDPRQRLSWPDLLYHPFIAGHVTIITEPAGPDLGTPFTSRLPPE
LQVLKDEQAHRLAPKGNQSRILTQAYKRMAEEAMQKKHQNTGPALEQEDKTSKVAPGTAPLPRLGATPQE
SSLLAGILASELKSSWAKSGTGEVPSAPRENRTTPDCERAFPEERPEVLGQRSTDVVDLENEEPDSDNEW
QHLLETTEPVPIQLKAPLTLLCNPDFCQRIQSQLHEAGGQILKGILEGASHILPAFRVLSSLLSSCSDSV
ALYSFCREAGLPGLLLSLLRHSQESNSLQQQSWYGTFLQDLMAVIQAYFACTFNLERSQTSDSLQVFQEA
ANLFLDLLGKLLAQPDDSEQTLRRDSLMCFTVLCEAMDGNSRAISKAFYSSLLTTQQVVLDGLLHGLTVP
QLPVHTPQGAPQVSQPLREQSEDIPGAISSALAAICTAPVGLPDCWDAKEQVCWHLANQLTEDSSQLRPS
LISGLQHPILCLHLLKVLYSCCLVSEGLCRLLGQEPLALESLFMLIQGKVKVVDWEESTEVTLYFLSLLV
FRLQNLPCGMEKLGSDVATLFTHSHVVSLVSAAACLLGQLGQQGVTFDLQPMEWMAAATHALSAPAEVRL
TPPGSCGFYDGLLILLLQLLTEQGKASLIRDMSSSEMWTVLWHRFSMVLRLPEEASAQEGELSLSSPPSP
EPDWTLISPQGMAALLSLAMATFTQEPQLCLSCLSQHGSILMSILKHLLCPSFLNQLRQAPHGSEFLPVV
VLSVCQLLCFPFALDMDADLLIGVLADLRDSEVAAHLLQVCCYHLPLMQVELPISLLTRLALMDPTSLNQ
FVNTVSASPRTIVSFLSVALLSDQPLLTSDLLSLLAHTARVLSPSHLSFIQELLAGSDESYRPLRSLLGH
PENSVRAHTYRLLGHLLQHSMALRGALQSQSGLLSLLLLGLGDKDPVVRCSASFAVGNAAYQAGPLGPAL
AAAVPSMTQLLGDPQAGIRRNVASALGNLGPEGLGEELLQCEVPQRLLEMACGDPQPNVKEAALIALRSL
QQEPGIHQVLVSLGASEKLSLLSLGNQSLPHSSPRPASAKHCRKLIHLLRPAHSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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