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Report for CCDS22710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22710.1 Public Mus musculus 8 Kcng4 23 108 98 CCDS HistoryNCBI Gene:66733Re-query CCDS DB by CCDS ID:22710.1Re-query CCDS DB by GeneID:66733See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22710.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061828.9 ENSMUSP00000056552.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061828.9Link to Ensembl Protein Viewer:ENSMUSP00000056552.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000061828Re-query CCDS DB by Protein ID:ENSMUSP00000056552
Original member Current member EBI ENSMUST00000164382.1 ENSMUSP00000129687.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164382.1Link to Ensembl Protein Viewer:ENSMUSP00000129687.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164382Re-query CCDS DB by Protein ID:ENSMUSP00000129687
Original member Current member NCBI NM_025734.2 NP_080010.2 Accepted alive Link to Nucleotide Sequence:NM_025734.2Link to Protein Sequence:NP_080010.2Re-query CCDS DB by Nucleotide ID:NM_025734Re-query CCDS DB by Protein ID:NP_080010Link to BLAST:NP_080010.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080010.2 506 Q80XM3 506 100% 0 0

Chromosomal Locations for CCDS 22710.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119625649 119626419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119632886 119633635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGCCCATGTCTTCCAGAGACAGGGACTTGCATCCTGGACACCATCACTTTGGCTCCTGCAGCCCCTTGA
GCCAGCTCTGGCCGGGCCCCGAGCCTAAGTCAGTCAAGGGCCTTTACTACAGCAGGGCCCGGAAGGTGGG
CAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGCGGTACCTG
CTGCCCTGGAGCACCCTGGATGCCTTCCCGCTGAGCCGCCTGAGCAGGCTCCGGCTGTGCCGCAGCCATG
AGGAGATCACGCAGCTCTGCGATGACTACGATGAGGACAGCCAGGAGTTCTTCTTCGACAGGAACCCCAG
CGCCTTCGGGGTGATCGTGAGCTTCCTGGCCGCGGGAAAGCTGGTGCTTCTGCGAGAGATGTGCGCCCTG
TCCTTCCGGGAGGAGCTGAGCTACTGGGGCATCGAGGAAACCAACCTGGAGCGCTGCTGCCTGCGCAAGC
TGCTGAAGAAGCTGGAGGAGGCGGCCGAGCTGCGCCGGGAGGAGGCTGCCCAGCGCCAGCAGCAGCGCCA
GGCCTGCCACTCCGAGGTGCAGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGCGTGAAATGGTGGAG
GACCCACAGTCGGGGCTGCCCGGGAAGGTCTTCGCCTGCCTCTCCGTGCTCTTCGTGGCAACCACGGCTG
TCAGCCTGTGTGTGAGCACCATGCCCGACTTCAGGGCTGAGGAGGGCAAGGGAGAATGCACTAGAAAGTG
CTATTACATCTTCGTGGTGGAATCCATCTGTGTGGCCTGGTTCTCGCTGGAGTTTTGCCTGCGCTTTGTC
CAGGCCCCGAACAAATGTCAGTTCTTCCGCGGGCCCCTGAATGTCATCGACATTCTAGCCATCTCCCCAT
ACTATGTGTCGCTCGCAGTGTCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCT
GGAGAAAGTGGGGTTAGTGCTGCGTGTTCTGCGGGCACTACGCATCCTCTACGTAATGCGCCTGGCTCGC
CACTCCCTGGGGCTGCAGACGCTGGGCCTCACTGTGCGCCGCTGCGCCCGAGAGTTTGGTCTCCTGATGC
TCTTCCTGGCTGTGGCGGTTACCCTCTTCTCACCGTTGGTCTATGTAGCTGAGAATGAGTCCGGAAGGGT
CCTGGAGTTCACTAGCATCCCCGCATCCTATTGGTGGGCCATCATCTCCATGACGACCGTGGGCTATGGG
GACATGGTCCCTCGCAGCGTCCCGGGACAGATGGTGGCTCTGAGCAGCATCCTTAGCGGGATCCTTATCA
TGGCTTTCCCAGCCACATCCATCTTCCACACGTTCTCTCACTCCTACCTGGAGCTGAAGCGGGAGCAGGA
GCAGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAGTGAC
GTAGATGATCTGGTCCCTGAGGGTCTGACCTCCCCAGGCCGCTACATGTAA

Translation (506 aa):
MPMSSRDRDLHPGHHHFGSCSPLSQLWPGPEPKSVKGLYYSRARKVGNQDASPEANLKEILVNVGGQRYL
LPWSTLDAFPLSRLSRLRLCRSHEEITQLCDDYDEDSQEFFFDRNPSAFGVIVSFLAAGKLVLLREMCAL
SFREELSYWGIEETNLERCCLRKLLKKLEEAAELRREEAAQRQQQRQACHSEVQASRWARSMNQLREMVE
DPQSGLPGKVFACLSVLFVATTAVSLCVSTMPDFRAEEGKGECTRKCYYIFVVESICVAWFSLEFCLRFV
QAPNKCQFFRGPLNVIDILAISPYYVSLAVSDESPEAGERPSSSSYLEKVGLVLRVLRALRILYVMRLAR
HSLGLQTLGLTVRRCAREFGLLMLFLAVAVTLFSPLVYVAENESGRVLEFTSIPASYWWAIISMTTVGYG
DMVPRSVPGQMVALSSILSGILIMAFPATSIFHTFSHSYLELKREQEQVQARLRRLQNTNSASERELLSD
VDDLVPEGLTSPGRYM


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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