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Report for CCDS21601.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21601.1 Public Mus musculus 7 Or51q1c 23 108 98 CCDS HistoryNCBI Gene:259124Re-query CCDS DB by CCDS ID:21601.1Re-query CCDS DB by GeneID:259124See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21601.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000209757.2 ENSMUSP00000148160.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209757.2Link to Ensembl Protein Viewer:ENSMUSP00000148160.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000209757Re-query CCDS DB by Protein ID:ENSMUSP00000148160
Original member Current member NCBI NM_147120.1 NP_667331.1 Accepted alive Link to Nucleotide Sequence:NM_147120.1Link to Protein Sequence:NP_667331.1Re-query CCDS DB by Nucleotide ID:NM_147120Re-query CCDS DB by Protein ID:NP_667331Link to BLAST:NP_667331.1

Chromosomal Locations for CCDS 21601.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104003259 104004224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGTTGCGTCCATCAAGTATGTCAGAAGTAACTAACACCACTCATGGCCCTTTCTACTTCATCCTCACCG
GCATCCCAGGATTTGAGGATATCCATCTCTGGATCTCCATCCCCTTCTTCTGCCTCTACACCATATCCAT
CATGGGCAACACCACCATCCTAACTGTCATCCGCACAGAGCCATCTCTCCACGAGCCCATGTACCTCTTC
CTCTCTATGCTGGCCCTCACTGACCTGGGTCTAACTCTCACCACACTCCCTACAGTCATGCAGGTCCTCT
GGTTCAACATTCGGGAAATCAGCTTTGAGGCCTGCTTTGCACAGGTATTCTTCCTCCATGGGTTCTCATT
CATGGAATCATCTGTTCTATTGGCCATGTCCTTTGACCGTTATGTGGCCATCTGTCGCCCACTCCACTAT
GCCTCCATCCTCACCAGTGAGGTCATTGCTAGAATAGGGTTGGCCATCATTTGCCGCTGTGTCTTGGCTG
TTCTTCCCTCCCTTTTCCTGCTCAAGCGCCTGCCCTTCTGCCATTCCCACCTTCTTTCTCACTCCTACTG
CCTCCACCAGGATATGATTCACCTGGTCTGCGCTGACATCAGAGTCAACAGATGGTACGGATTTGCTCTG
GTCCTGCTCATTATTGTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAAAGTGTCC
TGAACACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTAGCTGTTCT
GGTTCTCTATGTCCCTATGGTTGGTGTGTCTATGACTCACCGCTTTGCGAAGCATGCTTCTCCACTGGTC
CATGTTCTCATGGCCAATATCTATCTGCTGGCACCTCCTGTGATGAACCCCATCATTTACAGTGTAAAGA
CCAAGCAGATCCGTCAAGGAATTACTCGCCTCCTGTTGCAAAGAAAGGTGCACTAA

Translation (321 aa):
MLRPSSMSEVTNTTHGPFYFILTGIPGFEDIHLWISIPFFCLYTISIMGNTTILTVIRTEPSLHEPMYLF
LSMLALTDLGLTLTTLPTVMQVLWFNIREISFEACFAQVFFLHGFSFMESSVLLAMSFDRYVAICRPLHY
ASILTSEVIARIGLAIICRCVLAVLPSLFLLKRLPFCHSHLLSHSYCLHQDMIHLVCADIRVNRWYGFAL
VLLIIVLDPLLIVLSYALILKSVLNTATWTERLRALNNCLSHMLAVLVLYVPMVGVSMTHRFAKHASPLV
HVLMANIYLLAPPVMNPIIYSVKTKQIRQGITRLLLQRKVH


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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