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Report for CCDS20038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20038.1 Public Mus musculus 6 Tas2r138 23 108 98 CCDS HistoryNCBI Gene:387513Re-query CCDS DB by CCDS ID:20038.1Re-query CCDS DB by GeneID:387513See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20038.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076565.2 ENSMUSP00000075876.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076565.2Link to Ensembl Protein Viewer:ENSMUSP00000075876.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000076565Re-query CCDS DB by Protein ID:ENSMUSP00000075876
Original member Current member NCBI NM_001001451.1 NP_001001451.1 Accepted alive Link to Nucleotide Sequence:NM_001001451.1Link to Protein Sequence:NP_001001451.1Re-query CCDS DB by Nucleotide ID:NM_001001451Re-query CCDS DB by Protein ID:NP_001001451Link to BLAST:NP_001001451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001451.1 331 Q7TQA6 331 100% 0 0

Chromosomal Locations for CCDS 20038.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 40612315 40613310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGCTGAGTCTGACTCCTGTCTTAACTGTGTCCTATGAAGCCAAGATTTCATTTCTGTTCCTTTCAGCCA
TGGAGTTTGCAGTGGGAATCCTGGCCAACGCCTTCATTGTCTTGGTAAATGTTTGGGATGTGGTAAAAAA
GCAGCCCTTGAACAACTGTGACATCGCACTGCTGTGTCTCAGCATCACTCGGCTTTTCCTGCAGGGCCTT
CTGCTTCTGGATGCTATTCAGCTCGCCTGCTTCCAGCAGATGAAAGACCCACTGAGCCACAACTACCAAG
CCATCCTCACTCTCTGGATGATTGCAAACCAAGTGAGCCTCTGGCTGGCTGCCTGCCTCAGTCTCCTCTA
CTGCTCCAAGATTGTCCGCTTCTCTCACACCTTTCCACTCCATGTAGCAAGCTGGGTCTCCAGGAGATTT
CTTCAGATGCTTCTAGTTGTTCTTCTTCTCTCCTGCATCTGCACTGCCCTTTGTTTGTGGGACTTTTTTT
GCAGATCTCACTCCACGGTCACATCTCTACTGCACCTGAACAGCACAGAATTCAGTTTGCAAATTGCAAA
ACTCAATTTCTTTTACTCGTTTATCTTCTGCAATGTGGGCTCTGTCCCCCCTTCTCTAGCTTTCCTGGTT
TCCTCGGGAGTGCTGGTTATCTCCCTGGGGAGTCACATGAGGACTATGAAGTCCCAAACCAGCAGCTCTG
GTGACCCCAGCCTTGAGGCCCACATCAGAGCCATCATATTTCTGATCTCCTTTTTCTGTTTTTACGTGGT
GTCATTCTGTGCTGCTTTAATATCAATACCCTTACTGATGCTATGGCACAATAAGGGGGGAGTGATGATT
TGTATAGGGATGATGGCAGCTTGTCCTTCGGGACATGCAGCCATCCTGATATCAGGCAATGCTAAGCTGA
GGAGGGCCATAGAGACCATGCTATTCTGGTTTCAAAGCAGGCAAAAGGTGAGACCAGTCCACAAGGTTCC
TCCCAGGACACTCTGA

Translation (331 aa):
MLSLTPVLTVSYEAKISFLFLSAMEFAVGILANAFIVLVNVWDVVKKQPLNNCDIALLCLSITRLFLQGL
LLLDAIQLACFQQMKDPLSHNYQAILTLWMIANQVSLWLAACLSLLYCSKIVRFSHTFPLHVASWVSRRF
LQMLLVVLLLSCICTALCLWDFFCRSHSTVTSLLHLNSTEFSLQIAKLNFFYSFIFCNVGSVPPSLAFLV
SSGVLVISLGSHMRTMKSQTSSSGDPSLEAHIRAIIFLISFFCFYVVSFCAALISIPLLMLWHNKGGVMI
CIGMMAACPSGHAAILISGNAKLRRAIETMLFWFQSRQKVRPVHKVPPRTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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