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Report for CCDS12192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12192.1 Public Homo sapiens 19 TIMM44 24 110 108 CCDS HistoryNCBI Gene:10469Re-query CCDS DB by CCDS ID:12192.1Re-query CCDS DB by GeneID:10469See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12192.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270538.8 ENSP00000270538.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270538.8Link to Ensembl Protein Viewer:ENSP00000270538.2Re-query CCDS DB by Nucleotide ID:ENST00000270538Re-query CCDS DB by Protein ID:ENSP00000270538
Original member Current member NCBI NM_006351.4 NP_006342.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006351.4Link to Protein Sequence:NP_006342.2Re-query CCDS DB by Nucleotide ID:NM_006351Re-query CCDS DB by Protein ID:NP_006342Link to BLAST:NP_006342.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006342.2 452 O43615 452 100% 0 0

Chromosomal Locations for CCDS 12192.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7927187 7927306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7927657 7927767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7928077 7928166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7931138 7931188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7932627 7932751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7932840 7932932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7933485 7933570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7933864 7934003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7934089 7934238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7935065 7935145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7938027 7938197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7941102 7941197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7943607 7943651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGCGGCGGCGGCCCTGCGGAGTGGCTGGTGCCGCTGTCCACGGAGATGCCTCGGCAGTGGAATCCAAT
TTCTTTCCAGCCACAACCTACCCCATGGGTCGACCTATCAGATGCGCCGGCCGGGCGGAGAGCTGCCACT
GTCCAAATCATATTCTTCTGGAAACAGAAAAGGCTTTCTGTCCGGCTTGCTAGATAATGTCAAACAAGAA
TTAGCCAAAAACAAAGAAATGAAAGAAAGTATAAAAAAATTCCGTGACGAGGCCAGAAGGCTAGAAGAAT
CAGACGTGCTCCAGGAGGCCAGAAGGAAATACAAAACCATCGAGTCAGAAACCGTGCGGACGAGCGAGGT
GCTACGGAAGAAGCTTGGGGAGCTGACGGGCACCGTGAAGGAGAGCCTTCACGAAGTCAGTAAAAGTGAT
CTCGGCCGGAAAATCAAGGAGGGCGTGGAGGAAGCAGCCAAGACGGCCAAGCAGTCGGCCGAGTCGGTAT
CCAAAGGCGGGGAGAAGCTGGGCAGGACAGCGGCCTTCAGAGCCCTCTCCCAGGGGGTGGAGTCCGTGAA
GAAGGAAATTGACGACAGCGTCCTGGGACAGACCGGGCCCTACCGGAGGCCCCAGCGACTCCGGAAGAGA
ACGGAGTTTGCGGGAGATAAGTTCAAGGAGGAGAAAGTGTTTGAGCCAAACGAGGAGGCCCTGGGGGTCG
TGCTGCACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAGGAGAACAACGTGGTGTTTAACCG
GTTCTTCGAGATGAAGATGAAGTATGACGAAAGCGACAACGCGTTCATCCGGGCATCCCGGGCCCTTACG
GACAAGGTCACCGACTTGCTGGGGGGCCTGTTCTCCAAGACAGAGATGTCGGAGGTGCTCACGGAGATCC
TCCGGGTGGACCCGGCCTTTGACAAGGACCGGTTTCTGAAACAGTGCGAGAACGACATCATCCCCAATGT
CCTGGAGGCCATGATTTCTGGAGAGCTTGACATTCTCAAAGACTGGTGCTATGAAGCTACTTACAGCCAG
CTGGCCCACCCCATCCAGCAGGCCAAGGCACTGGGTCTCCAGTTCCATTCTCGCATCCTAGACATTGACA
ACGTCGACCTGGCCATGGGCAAGATGATGGAGCAGGGGCCGGTGCTGATCATCACCTTCCAGGCACAGCT
GGTGATGGTGGTCAGGAACCCCAAAGGCGAGGTGGTGGAGGGTGACCCGGACAAGGTGCTGCGGATGCTG
TACGTGTGGGCGCTCTGCCGAGACCAGGACGAGCTCAACCCCTACGCGGCCTGGCGGCTCCTGGACATCT
CGGCCTCCAGCACCGAGCAGATTCTCTGA

Translation (452 aa):
MAAAALRSGWCRCPRRCLGSGIQFLSSHNLPHGSTYQMRRPGGELPLSKSYSSGNRKGFLSGLLDNVKQE
LAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRKKLGELTGTVKESLHEVSKSD
LGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALSQGVESVKKEIDDSVLGQTGPYRRPQRLRKR
TEFAGDKFKEEKVFEPNEEALGVVLHKDSKWYQQWKDFKENNVVFNRFFEMKMKYDESDNAFIRASRALT
DKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQ
LAHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML
YVWALCRDQDELNPYAAWRLLDISASSTEQIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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