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Report for CCDS11137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11137.1 Public Homo sapiens 17 RANGRF 24 110 108 CCDS HistoryNCBI Gene:29098Re-query CCDS DB by CCDS ID:11137.1Re-query CCDS DB by GeneID:29098See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000226105.11 ENSP00000226105.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000226105.11Link to Ensembl Protein Viewer:ENSP00000226105.6Re-query CCDS DB by Nucleotide ID:ENST00000226105Re-query CCDS DB by Protein ID:ENSP00000226105
Original member Current member NCBI NM_016492.5 NP_057576.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016492.5Link to Protein Sequence:NP_057576.2Re-query CCDS DB by Nucleotide ID:NM_016492Re-query CCDS DB by Protein ID:NP_057576Link to BLAST:NP_057576.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057576.2 186 Q9HD47-1 186 100% 0 0

Chromosomal Locations for CCDS 11137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8288789 8288865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8288956 8289072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8289258 8289414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8289503 8289588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8289813 8289936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGAGCCCACGAGAGACTGCCCGCTGTTCGGGGGCGCCTTTTCCGCCATCCTCCCCATGGGGGCCATTG
ACGTAAGCGACCTCCGACCGGTCCCGGACAATCAAGAAGTTTTCTGCCATCCCGTGACGGACCAGAGCCT
GATAGTGGAACTTCTCGAGCTGCAGGCCCACGTACGGGGCGAAGCGGCTGCGCGGTACCACTTTGAGGAT
GTTGGTGGCGTGCAGGGGGCTAGGGCTGTCCATGTGGAGTCTGTTCAGCCTCTCAGTTTGGAGAACCTGG
CCCTGAGGGGCCGCTGTCAAGAAGCCTGGGTCCTCTCTGGCAAGCAGCAGATAGCTAAGGAAAACCAGCA
GGTAGCAAAGGACGTGACACTTCATCAGGCCTTGCTGAGGCTGCCCCAGTACCAGACTGATCTCTTGCTT
ACCTTCAATCAGCCCCCCCCTGACAACAGGTCATCTCTTGGCCCCGAAAATCTGTCACCTGCACCCTGGA
GCCTGGGTGACTTTGAACAGCTGGTGACCAGTCTGACCCTTCACGATCCTAACATCTTTGGTCCCCAGTA
A

Translation (186 aa):
MEPTRDCPLFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYHFED
VGGVQGARAVHVESVQPLSLENLALRGRCQEAWVLSGKQQIAKENQQVAKDVTLHQALLRLPQYQTDLLL
TFNQPPPDNRSSLGPENLSPAPWSLGDFEQLVTSLTLHDPNIFGPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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