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Report for CCDS10634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10634.1 Public Homo sapiens 16 NUPR1 24 110 108 CCDS HistoryNCBI Gene:26471Re-query CCDS DB by CCDS ID:10634.1Re-query CCDS DB by GeneID:26471See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10634.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324873.8 ENSP00000315559.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324873.8Link to Ensembl Protein Viewer:ENSP00000315559.7Re-query CCDS DB by Nucleotide ID:ENST00000324873Re-query CCDS DB by Protein ID:ENSP00000315559
Original member Current member NCBI NM_012385.3 NP_036517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012385.3Link to Protein Sequence:NP_036517.1Re-query CCDS DB by Nucleotide ID:NM_012385Re-query CCDS DB by Protein ID:NP_036517Link to BLAST:NP_036517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036517.1 82 O60356-1 82 100% 0 0

Chromosomal Locations for CCDS 10634.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 28538019 28538155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28538796 28538907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (249 nt):
ATGGCCACCTTCCCACCAGCAACCAGCGCCCCCCAGCAGCCCCCAGGCCCGGAGGACGAGGACTCCAGCC
TGGATGAATCTGACCTCTATAGCCTGGCCCATTCCTACCTCGGAGGTGGAGGCCGGAAAGGTCGCACCAA
GAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTG
CAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTGA

Translation (82 aa):
MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKL
QNSERKKRGARR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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