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Report for CCDS75899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75899.1 Public Homo sapiens 9 WDR38 24 110 108 CCDS HistoryNCBI Gene:401551Re-query CCDS DB by CCDS ID:75899.1Re-query CCDS DB by GeneID:401551See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75899.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618744.4 ENSP00000483432.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618744.4Link to Ensembl Protein Viewer:ENSP00000483432.1Re-query CCDS DB by Nucleotide ID:ENST00000618744Re-query CCDS DB by Protein ID:ENSP00000483432
Original member Current member NCBI NM_001276376.2 NP_001263305.1 Accepted alive Link to Nucleotide Sequence:NM_001276376.2Link to Protein Sequence:NP_001263305.1Re-query CCDS DB by Nucleotide ID:NM_001276376Re-query CCDS DB by Protein ID:NP_001263305Link to BLAST:NP_001263305.1

Chromosomal Locations for CCDS 75899.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 124854230 124854325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124855797 124855958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124856240 124856320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124856469 124856600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124856732 124856881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124857364 124857411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124857499 124857630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGCCAGATGCTGCTCACAGGCTCAGAAGATGGCTGCGTGTATGGCTGGGAGACCCGGAGTGGGCAGCT
GCTGTGGAGGCTGGGTGGCCACACAGATGGTGCTGTGTCCTGTGTCACGTCACCTTTCCACCTTCCCCGA
CCCCGGGCTGGTGCCTGCAGGTCACCAACGGAGTGTGGAGACGGTCAGCTTCAGCCCTGACTCGAGACAG
CTGGCATCAGGTGGCTGGGACAAGCGGGTGATGCTCTGGGATGTGCAGTCCGGCCAGATGCTGCGCCTCT
TAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGCCACCGGCTC
CTGGGACTCCACCGTACACATCTGGGACCTGCGGATGGTGACCCCAGCAGTCTCCCACCAGGCGCTAGAG
GGACACAGTGCCAACATCAGCTGCCTGTGCTATTCAGCATCCGGCCTCCTGGCATCCGGCTCCTGGGACA
AGACCATCCACATCTGGAAGCCCACAACCAGCAGCCTGCTTATCCAACTGAAGGGCCATGTCACCTGGGT
GAAGAGCATAGCCTTCTCTCCCGACGAGCTGTGGCTGGCCAGCGCCGGCTATTCCCGCATGGTCAAAGTC
TGGGACTGCAACACAGGAAAGTGCCTTGAGACCCTGAAGCAGGGAGTCCTGGATGTGGCCCACACCTGTG
CCTTCACCCCAGATGGGAAAATCTTAGTGTCTGGAGCTGCCGATCAGACTAGACGTCAAATATCCCGCAC
GTCCAAATCACCCAGGGACCCTCAAACCTAA

Translation (266 aa):
MARCCSQAQKMAACMAGRPGVGSCCGGWVATQMVLCPVSRHLSTFPDPGLVPAGHQRSVETVSFSPDSRQ
LASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALE
GHSANISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKV
WDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRRQISRTSKSPRDPQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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