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Report for CCDS4847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4847.1 Public Homo sapiens 6 UNC5CL 24 110 108 CCDS HistoryNCBI Gene:222643Re-query CCDS DB by CCDS ID:4847.1Re-query CCDS DB by GeneID:222643See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244565.8 ENSP00000244565.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244565.8Link to Ensembl Protein Viewer:ENSP00000244565.3Re-query CCDS DB by Nucleotide ID:ENST00000244565Re-query CCDS DB by Protein ID:ENSP00000244565
Original member Current member EBI ENST00000373164.1 ENSP00000362258.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373164.1Link to Ensembl Protein Viewer:ENSP00000362258.1Re-query CCDS DB by Nucleotide ID:ENST00000373164Re-query CCDS DB by Protein ID:ENSP00000362258
Original member Current member NCBI NM_173561.3 NP_775832.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173561.3Link to Protein Sequence:NP_775832.2Re-query CCDS DB by Nucleotide ID:NM_173561Re-query CCDS DB by Protein ID:NP_775832Link to BLAST:NP_775832.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775832.2 518 Q8IV45 518 100% 0 0

Chromosomal Locations for CCDS 4847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41028373 41028595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41030388 41030501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41030655 41030755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41031681 41031748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032036 41032137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032884 41033146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41033881 41034181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41034690 41035074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1557 nt):
ATGTGCCCCCAGGAGAGTTCATTCCAACCCTCCCAGTTCCTACTGCTGGTGGGGGTCCCAGTGGCAAGTG
TCCTCCTTCTGGCCCAATGCCTTCGATGGCACTGCCCTAGAAGGCTGCTGGGGGCCTGCTGGACACTGAA
TGGTCAAGAGGAACCAGTGTCCCAGCCTACCCCCCAACTAGAAAATGAGGTCTCAAGGCAGCACCTGCCA
GCCACACTGCCAGAGATGGTTGCCTTCTACCAGGAGCTACACACACCCACTCAAGGCCAGACCATGGTCC
GCCAGTTGATGCACAAACTGTTGGTGTTTTCGGCTCGAGAGGTGGATCACCGCGGCGGTTGCCTGATGCT
CCAGGATACAGGCATCTCCTTGCTCATCCCACCAGGTGCTGTGGCTGTGGGCCGCCAGGAGCGGGTGTCT
TTGATCCTGGTGTGGGACCTGTCGGACGCCCCATCGCTGTCCCAAGCCCAGGGGCTGGTAAGCCCTGTGG
TGGCATGTGGCCCCCATGGGGCCTCCTTCCTGAAGCCTTGCACTCTCACGTTCAAACACTGTGCCGAGCA
GCCCAGCCATGCTCGCACCTACAGCAGCAACACTACCCTGCTGGATGCCAAGGTATGGAGGCCCCTGGGG
CGGCCGGGGGCCCACGCCTCCCGGGATGAGTGTCGCATCCACCTCTCCCACTTCAGCCTCTACACCTGTG
TGCTGGAGGCACCTGTGGGGCGCGAAGCCCGCAAATGGCTGCAGCTGGCCGTATTCTGCTCACCGCTGGT
GCCAGGACAGTCCCATCTGCAACTGCGTATCTACTTCCTCAACAACACGCCCTGCGCCCTGCAGTGGGCA
CTGACCAACGAGCAGCCCCATGGTGGGCGCCTGCGTGGGCCCTGCCAGCTCTTCGACTTCAATGGGGCTA
GGGGCGACCAGTGCCTGAAGCTCACGTACATCTCAGAGGGTTGGGAGAATGTGGATGACAGCAGTTGCCA
GCTGGTTCCCCATCTCCACATCTGGCATGGAAAGTGCCCCTTCCGCTCCTTCTGCTTCCGGAGAAAAGCA
GCCGATGAGAATGAGGACTGTTCAGCACTAACCAATGAGATCATTGTCACCATGCACACCTTCCAGGATG
GCTTGGAGACCAAGTATATGGAAATCCTCAGATTCCAGGCATCAGAGGAGGAATCCTGGGCAGCGCCACC
ACCTGTTTCCCAGCCGCCCCCATGCAATAGGCTGCCCCCAGAGCTCTTTGAGCAGCTGCGGATGTTATTG
GAGCCAAACAGCATCACCGGCAATGACTGGCGCAGACTGGCCTCCCACCTGGGGCTTTGCGGCATGAAGA
TCCGGTTCCTGTCCTGCCAGCGCAGCCCCGCAGCGGCCATCCTGGAGTTGTTTGAGGAGCAGAACGGCAG
CCTGCAGGAGCTGCACTACCTCATGACCGTCATGGAGCGGCTAGACTGCGCCTCCGCCATCCAGAACTAC
CTGAGTGGGACACACGGCGGCAGCCCAGGCCCCGAGCGCGGGGGCGCCCGGGATAACCAGGGCCTGGAGC
TGGACGAGAAGCTCTGA

Translation (518 aa):
MCPQESSFQPSQFLLLVGVPVASVLLLAQCLRWHCPRRLLGACWTLNGQEEPVSQPTPQLENEVSRQHLP
ATLPEMVAFYQELHTPTQGQTMVRQLMHKLLVFSAREVDHRGGCLMLQDTGISLLIPPGAVAVGRQERVS
LILVWDLSDAPSLSQAQGLVSPVVACGPHGASFLKPCTLTFKHCAEQPSHARTYSSNTTLLDAKVWRPLG
RPGAHASRDECRIHLSHFSLYTCVLEAPVGREARKWLQLAVFCSPLVPGQSHLQLRIYFLNNTPCALQWA
LTNEQPHGGRLRGPCQLFDFNGARGDQCLKLTYISEGWENVDDSSCQLVPHLHIWHGKCPFRSFCFRRKA
ADENEDCSALTNEIIVTMHTFQDGLETKYMEILRFQASEEESWAAPPPVSQPPPCNRLPPELFEQLRMLL
EPNSITGNDWRRLASHLGLCGMKIRFLSCQRSPAAAILELFEEQNGSLQELHYLMTVMERLDCASAIQNY
LSGTHGGSPGPERGGARDNQGLELDEKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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