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Report for CCDS45046.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45046.1 Public Homo sapiens 13 SPRYD7 24 110 108 CCDS HistoryNCBI Gene:57213Re-query CCDS DB by CCDS ID:45046.1Re-query CCDS DB by GeneID:57213See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 45046.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378195.6 ENSP00000367437.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378195.6Link to Ensembl Protein Viewer:ENSP00000367437.2Re-query CCDS DB by Nucleotide ID:ENST00000378195Re-query CCDS DB by Protein ID:ENSP00000367437
Original member Current member EBI ENST00000613924.1 ENSP00000484495.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613924.1Link to Ensembl Protein Viewer:ENSP00000484495.1Re-query CCDS DB by Nucleotide ID:ENST00000613924Re-query CCDS DB by Protein ID:ENSP00000484495
Original member Current member NCBI NM_001127482.3 NP_001120954.1 Accepted alive Link to Nucleotide Sequence:NM_001127482.3Link to Protein Sequence:NP_001120954.1Re-query CCDS DB by Nucleotide ID:NM_001127482Re-query CCDS DB by Protein ID:NP_001120954Link to BLAST:NP_001120954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120954.1 157 Q5W111-2 157 100% 0 0

Chromosomal Locations for CCDS 45046.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 49915063 49915160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49921478 49921580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49927919 49928085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49936130 49936235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (474 nt):
ATGGCCACCTCGGTGTTGTGCTGCCTGCGGTGCTGCAGAGACGGGGGGACTGGCCACATCCCTCTGAAGG
AGATGCCGGCCGTGCAGCTGGACACGCAGCACATGGGAATCTGGGGTATTGGTGTTGCAACTCAGAAGGT
TAACTTGAATCAGATTCCTCTTGGCCGAGATATGCACAGTCTGGTGATGAGAAATGATGGAGCCCTTTAC
CACAACAATGAAGAGAAAAATAGGCTGCCAGCAAACAGTCTTCCGCAGGAAGGAGATGTGGTGGGTATTA
CTTATGACCATGTCGAATTAAATGTATACTTGAATGGAAAAAACATGCATTGTCCAGCATCAGGTATACG
AGGGACAGTGTATCCAGTTGTTTATGTTGATGACAGTGCAATTTTGGATTGCCAGTTCAGTGAGTTTTAT
CATACGCCTCCACCTGGTTTTGAAAAAATATTATTTGAACAGCAAATCTTCTGA

Translation (157 aa):
MATSVLCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALY
HNNEEKNRLPANSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFY
HTPPPGFEKILFEQQIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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