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Report for CCDS44108.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44108.1 Public Homo sapiens 1 C1orf94 24 110 108 CCDS HistoryNCBI Gene:84970Re-query CCDS DB by CCDS ID:44108.1Re-query CCDS DB by GeneID:84970See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44108.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000488417.2 ENSP00000435634.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000488417.2Link to Ensembl Protein Viewer:ENSP00000435634.1Re-query CCDS DB by Nucleotide ID:ENST00000488417Re-query CCDS DB by Protein ID:ENSP00000435634
Original member Current member NCBI NM_001134734.2 NP_001128206.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134734.2Link to Protein Sequence:NP_001128206.1Re-query CCDS DB by Nucleotide ID:NM_001134734Re-query CCDS DB by Protein ID:NP_001128206Link to BLAST:NP_001128206.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128206.1 598 Q6P1W5-1 598 100% 0 0

Chromosomal Locations for CCDS 44108.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 34177790 34178109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34197225 34197913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34200772 34201032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34202084 34202259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34208157 34208234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34212210 34212406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34218686 34218761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1797 nt):
ATGAGGGGTGGTGGTGGTTGTGTTCTAGCCCTGGGTGGACAGAGGGGCTTCCAGAAAGAGAGGAGGAGGA
TGGCCAGCGGGAATGGGCTTCCTTCATCCTCGGCCCTGGTGGCCAAGGGCCCCTGCGCCCTGGGCCCATT
CCCCAGATACATCTGGATCCACCAGGACACACCCCAAGACAGCCTAGACAAGACTTGCCATGAAATCTGG
AAGAGAGTTCAAGGCCTGCCTGAGGCCTCACAGCCCTGGACCTCCATGGAGCAGCTCTCTGTCCCTGTGG
TTGGAACTCTAAGAGGCAATGAGCTCAGCTTTCAAGAAGAAGCTCTGGAGCTCAGCAGTGGCAAAGATGA
GATCTCCTTGTTGGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGT
TCTGGGGAGCTGGAGGTACCCGGCAGCTCTCCCGAGGGGACCAGAGAGCTGGCTCCCTGCATTCTTGCCC
CTCCTCTAGTGGCAGGCAGTAATGAGCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGCTTCTGAAGCA
GAAGGTGGCCATGCCCGTTATCAGCAGCAGGCAGGACTGTGATTCTGCCACTTCTACTGTCACAGACATT
CTGTGTGCCGCCGAGGTCAAGAGCAGCAAGGGGACAGAGGACAGGGGCCGCATCCTAGGTGACTCCAACT
TGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAA
GAATGTGCTGGACAAGACAAGGGTCACCAAGGACTTCCTACAGGACAACCTGTTCAGTGGCCCTGGACCC
AAGGAGCCCACAGGGCTGAGCCCATTTCTGCTGCTGCCTCCCCGACCTCCTCCTGCACGTCCTGACAAGC
TCCCTGAGCTCCCTGCTCAGAAGAGGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGA
CCCTGCTGTGGAGAGGCACCACTTGATGGAATGGAGCCCTGGCACCAAGGAGCCAAAAAAGGGTCAAGGG
AGCCTCTTTCTCAGCCAGTGGCCCCAGAGCCAGAAGGACGCCTGTGGTGAGGAGGGTTGCTGTGACGCAG
TGGGCACCGCATCACTGACCCTGCCGCCCAAGAAACCTACATGTCCAGCCGAGAAGAACTTGCTCTATGA
GTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCCG
GAGCTGAAATTTAACGCACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTACACAGGGAATGTTTTCA
CTCCACACTTTCCTACAGCCATGACCTCAGCAACCCTGAACCAGCCACTCTGGCTCAACCTGAACTATCC
ACCTCCACCAGTGTTCACGAATCACTCTACCTTCTTGCAGTATCAGGGCCTGTACCCACAGCAGGCAGCG
AGGATGCCCTATCAGCAGGCTTTGCACCCGCAGCTGGGATGTTACTCCCAACAGGTGATGCCATACAACC
CACAGCAGATGGGACAGCAGATCTTCCGCTCTTCCTACACCCCTCTGCTGAGCTACATCCCTTTTGTCCA
GCCCAATTATCCCTACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTCCCCTAATG
GCAGGAGATGGACCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGGCTCGACATCCGGAGGGCCCTTGA
TGCACAGCCCCTATTTTTCTTCCAGTGGGAATGGCATAAACTTTTAG

Translation (598 aa):
MRGGGGCVLALGGQRGFQKERRRMASGNGLPSSSALVAKGPCALGPFPRYIWIHQDTPQDSLDKTCHEIW
KRVQGLPEASQPWTSMEQLSVPVVGTLRGNELSFQEEALELSSGKDEISLLVEQEFLSLTKEHSILVEES
SGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIVGDKLLKQKVAMPVISSRQDCDSATSTVTDI
LCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGP
KEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQG
SLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGP
ELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA
RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLM
AGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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