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Report for CCDS357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
357.1 Public Homo sapiens 1 EIF3I 24 110 108 CCDS HistoryNCBI Gene:8668Re-query CCDS DB by CCDS ID:357.1Re-query CCDS DB by GeneID:8668See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 357.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000677760.1 ENSP00000502867.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677760.1Link to Ensembl Protein Viewer:ENSP00000502867.1Re-query CCDS DB by Nucleotide ID:ENST00000677760Re-query CCDS DB by Protein ID:ENSP00000502867
Original member Current member EBI ENST00000676801.1 ENSP00000503348.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676801.1Link to Ensembl Protein Viewer:ENSP00000503348.1Re-query CCDS DB by Nucleotide ID:ENST00000676801Re-query CCDS DB by Protein ID:ENSP00000503348
Original member Current member EBI ENST00000677701.1 ENSP00000503539.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677701.1Link to Ensembl Protein Viewer:ENSP00000503539.1Re-query CCDS DB by Nucleotide ID:ENST00000677701Re-query CCDS DB by Protein ID:ENSP00000503539
Original member Current member EBI ENST00000677202.1 ENSP00000504034.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677202.1Link to Ensembl Protein Viewer:ENSP00000504034.1Re-query CCDS DB by Nucleotide ID:ENST00000677202Re-query CCDS DB by Protein ID:ENSP00000504034
Original member Current member EBI ENST00000677711.2 ENSP00000504061.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000677711.2Link to Ensembl Protein Viewer:ENSP00000504061.1Re-query CCDS DB by Nucleotide ID:ENST00000677711Re-query CCDS DB by Protein ID:ENSP00000504061
Original member Current member NCBI NM_003757.4 NP_003748.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003757.4Link to Protein Sequence:NP_003748.1Re-query CCDS DB by Nucleotide ID:NM_003757Re-query CCDS DB by Protein ID:NP_003748Link to BLAST:NP_003748.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003748.1 325 Q13347 325 100% 0 0

Chromosomal Locations for CCDS 357.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32222442 32222444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32222538 32222630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32224034 32224121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32224410 32224475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32226171 32226320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32226403 32226530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32228499 32228609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32228727 32228816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32229135 32229208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32230927 32231019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32231115 32231196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACC
TCCTCTTTACTGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGCTGGGCAC
CTACATGGGCCATACCGGAGCTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGC
TCAGCTGACAACAGCTGTCGTCTCTGGGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAAGACCAATT
CGGCTGTCCGGACCTGCGGTTTTGACTTTGGGGGCAACATCATCATGTTCTCCACGGACAAGCAGATGGG
CTACCAGTGCTTTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTGACAACAATGAGCCCTACATG
AAGATCCCTTGCAATGACTCTAAAATCACCAGTGCTGTTTGGGGACCCCTGGGGGAGTGCATCATCGCTG
GCCATGAGAGTGGAGAGCTCAACCAGTATAGTGCCAAGTCTGGAGAGGTGTTGGTGAATGTTAAGGAGCA
CTCCCGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACCGCGTCCAAGGACAAC
ACAGCCAAGCTTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCTGTCAACT
CAGCTGCCCTCTCCCCCAACTATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCAC
AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTTCTTCCATTTGGCCTTTGAAGAAGAGTTTGGAAGA
GTCAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCCATCCTGATGGCAAGAGCTACAGCAGCGGCG
GCGAAGATGGTTACGTCCGTATCCATTACTTCGACCCACAGTACTTCGAATTTGAGTTTGAGGCTTAA

Translation (325 aa):
MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTG
SADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYM
KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDN
TAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGR
VKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDPQYFEFEFEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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