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Report for CCDS34635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34635.1 Public Homo sapiens 7 HUS1 24 110 108 CCDS HistoryNCBI Gene:3364Re-query CCDS DB by CCDS ID:34635.1Re-query CCDS DB by GeneID:3364See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258774.10 ENSP00000258774.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258774.10Link to Ensembl Protein Viewer:ENSP00000258774.5Re-query CCDS DB by Nucleotide ID:ENST00000258774Re-query CCDS DB by Protein ID:ENSP00000258774
Original member Current member NCBI NM_004507.4 NP_004498.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004507.4Link to Protein Sequence:NP_004498.1Re-query CCDS DB by Nucleotide ID:NM_004507Re-query CCDS DB by Protein ID:NP_004498Link to BLAST:NP_004498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004498.1 280 O60921-1 280 100% 0 0

Chromosomal Locations for CCDS 34635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47965356 47965438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47967806 47967925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47969219 47969318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47975613 47975687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47976730 47976837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47978417 47978593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47978689 47978816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47979468 47979519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGTCTGAACCACTTCACACGAATCAGTAACATGATAG
CCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCTTTGTGACAAGCT
GGCTAATGGAGGAGTGAGCATGTGGTGTGAGCTGGAACAGGAGAACTTCTTCAACGAATTTCAAATGGAG
GGTGTCTCTGCAGAAAACAATGAGATTTATTTAGAGCTAACATCGGAAAACTTATCTCGAGCCTTGAAGA
CTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAAACACTTTCCCTGCCTCACGGTCTCCGT
GGAGCTGTTATCTATGTCAAGCAGTAGCCGCATTGTGACCCATGACATCCCCATAAAGGTGATTCCTAGG
AAATTGTGGAAGGACTTACAAGAACCGGTGGTCCCAGATCCTGATGTTAGTATTTATTTACCAGTCTTGA
AGACTATGAAGAGTGTTGTGGAAAAAATGAAAAACATCAGCAATCACCTTGTTATTGAAGCAAACCTAGA
TGGAGAATTGAATTTGAAAATAGAAACTGAATTAGTATGTGTTACAACTCATTTTAAAGATCTTGGAAAT
CCTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAAACGTGGAACACATGGCTGAAGTGCACATAGATA
TTAGGAAGCTCCTACAGTTTCTTGCTGGACAACAAGTAAATCCCACAAAGGCCTTATGCAATATTGTGAA
TAACAAGATGGTGCATTTTGATCTGCTTCATGAAGACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCC
TAG

Translation (280 aa):
MKFRAKIVDGACLNHFTRISNMIAKLAKTCTLRISPDKLNFILCDKLANGGVSMWCELEQENFFNEFQME
GVSAENNEIYLELTSENLSRALKTAQNARALKIKLTNKHFPCLTVSVELLSMSSSSRIVTHDIPIKVIPR
KLWKDLQEPVVPDPDVSIYLPVLKTMKSVVEKMKNISNHLVIEANLDGELNLKIETELVCVTTHFKDLGN
PPLASESTHEDRNVEHMAEVHIDIRKLLQFLAGQQVNPTKALCNIVNNKMVHFDLLHEDVSLQYFIPALS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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