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Report for CCDS21592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21592.1 Public Mus musculus 7 Hbb-bh1 23 108 98 CCDS HistoryNCBI Gene:15132Re-query CCDS DB by CCDS ID:21592.1Re-query CCDS DB by GeneID:15132See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21592.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063957.5 ENSMUSP00000064865.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063957.5Link to Ensembl Protein Viewer:ENSMUSP00000064865.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000063957Re-query CCDS DB by Protein ID:ENSMUSP00000064865
Original member Current member NCBI NM_008219.3 NP_032245.1 Accepted alive Link to Nucleotide Sequence:NM_008219.3Link to Protein Sequence:NP_032245.1Re-query CCDS DB by Nucleotide ID:NM_008219Re-query CCDS DB by Protein ID:NP_032245Link to BLAST:NP_032245.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032245.1 147 P04444 147 100% 0 0

Chromosomal Locations for CCDS 21592.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103841752 103841880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103842691 103842913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103843019 103843110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGTTCACTTCACAGCTGAGGAGAAGGCAGCTATCACAAGCATCTGGGATAAAGTGGACTTGGAAAAAG
TTGGAGGAGAAACTCTGGGAAGGCTCCTGATTGTTTACCCATGGACTCAGAGATTCTTTGACAAGTTTGG
AAACCTCTCTTCTGCCCTGGCCATCATGGGAAACCCCCGGATTAGAGCCCATGGCAAGAAAGTGCTGACA
TCCTTGGGCTTGGGGGTTAAGAACATGGACAACCTCAAGGAGACCTTTGCTCATCTCAGTGAGCTGCACT
GTGACAAGCTTCATGTGGATCCTGAGAACTTCAAGCTCCTGGGCAACATGTTGGTGATTGTCCTTTCTAC
TCATTTTGCCAAGGAATTCACCCCAGAGGTGCAGGCTGCCTGGCAGAAGCTGGTGATTGGAGTGGCCAAT
GCTCTGTCCCACAAGTACCATTAA

Translation (147 aa):
MVHFTAEEKAAITSIWDKVDLEKVGGETLGRLLIVYPWTQRFFDKFGNLSSALAIMGNPRIRAHGKKVLT
SLGLGVKNMDNLKETFAHLSELHCDKLHVDPENFKLLGNMLVIVLSTHFAKEFTPEVQAAWQKLVIGVAN
ALSHKYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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