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Report for CCDS1303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1303.1 Public Homo sapiens 1 SUCO 24 110 108 CCDS HistoryNCBI Gene:51430Re-query CCDS DB by CCDS ID:1303.1Re-query CCDS DB by GeneID:51430See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1303.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263688.4 ENSP00000263688.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263688.4Link to Ensembl Protein Viewer:ENSP00000263688.3Re-query CCDS DB by Nucleotide ID:ENST00000263688Re-query CCDS DB by Protein ID:ENSP00000263688
Original member Current member NCBI NM_014283.5 NP_055098.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014283.5Link to Protein Sequence:NP_055098.1Re-query CCDS DB by Nucleotide ID:NM_014283Re-query CCDS DB by Protein ID:NP_055098Link to BLAST:NP_055098.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055098.1 1254 Q9UBS9-1 1254 100% 0 0

Chromosomal Locations for CCDS 1303.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172533436 172533497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172551512 172551626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172553260 172553370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172555869 172556023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557280 172557417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557644 172557794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172569019 172569142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570047 172570171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570663 172570730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172573891 172573998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172575518 172575623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172577539 172577559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172577764 172577819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172578298 172578389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172579202 172579267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585018 172585086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585858 172585948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172588760 172589926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172590984 172591071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172600064 172600168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602064 172602218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602696 172602787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172608747 172608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172609816 172610259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3765 nt):
ATGAAGAAGCACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCTTTCTGTGCTCTCTGGTCTGGCTTCCCA
GCTGGCGTGTATGTTGTAAAGAGAGTTCTTCAGCTTCAGCGTCATCATATTACTCTCAAGATGACAACTG
CGCACTAGAAAATGAAGATGTACAATTCCAGAAAAAGGATGAAAGAGAGGGACCTATCAATGCCGAATCA
TTGGGAAAATCAGGTTCAAATTTACCTATTTCTCCAAAAGAACATAAATTAAAAGATGATTCTATTGTGG
ATGTACAAAATACAGAGTCAAAAAAGTTAAGTCCACCGGTGGTGGAGACACTCCCTACAGTTGATTTGCA
TGAAGAGTCTTCCAATGCAGTTGTGGACAGTGAAACTGTTGAAAATATTTCCAGCTCATCTACCTCAGAA
ATCACTCCAATCTCAAAGCTTGATGAAATAGAAAAATCTGGTACTATTCCGATAGCCAAACCAAGTGAAA
CTGAGCAGTCTGAAACTGATTGTGATGTTGGTGAGGCCCTTGATGCTAGTGCTCCAATTGAACAACCTTC
CTTTGTCAGTCCACCTGACAGCCTTGTTGGCCAGCATATAGAAAATGTATCATCTTCACATGGTAAAGGA
AAGATAACAAAATCAGAATTTGAATCAAAAGTTTCAGCAAGTGAACAGGGCGGTGGTGATCCAAAATCTG
CATTGAATGCTTCAGATAATTTAAAAAATGAGAGCTCTGATTATACAAAACCAGGAGACATTGACCCTAC
ATCAGTAGCAAGTCCCAAAGATCCAGAAGATATACCAACATTTGATGAATGGAAGAAGAAAGTTATGGAA
GTAGAAAAAGAAAAAAGTCAGTCGATGCATGCATCTTCTAATGGAGGTTCACATGCCACCAAAAAGGTCC
AGAAAAATCGAAATAATTATGCCTCAGTAGAATGTGGTGCCAAAATTCTAGCAGCTAATCCAGAAGCCAA
GAGCACATCTGCTATTCTTATAGAAAATATGGATCTTTACATGTTGAATCCTTGCAGCACTAAAATTTGG
TTTGTTATTGAACTTTGTGAACCAATTCAAGTAAAACAGCTTGATATTGCAAATTATGAATTATTTTCTT
CTACTCCTAAAGATTTTCTGGTTTCTATCAGTGACAGATATCCAACAAATAAGTGGATTAAGCTGGGTAC
TTTTCATGGTAGAGATGAGCGGAATGTACAGAGTTTCCCTTTAGATGAACAGATGTATGCAAAATATGTC
AAGATGTTCATCAAGTACATAAAGGTTGAGTTGCTATCACATTTTGGATCAGAGCACTTTTGTCCATTAA
GCCTTATAAGGGTATTTGGCACTAGCATGGTGGAAGAATATGAAGAAATTGCTGATTCCCAGTATCACTC
AGAACGCCAGGAACTATTTGATGAGGACTATGATTATCCACTGGATTATAATACTGGAGAGGATAAATCC
TCAAAAAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAATATGGTGAATATTGCTGCTAATATTCTGG
GAGCAAAAACTGAAGACCTGACAGAAGGAAATAAAAGTATATCTGAGAATGCCACTGCCACAGCTGCACC
TAAAATGCCTGAATCAACTCCTGTTTCAACTCCTGTTCCATCTCCTGAGTATGTAACCACTGAAGTACAC
ACACATGACATGGAGCCGTCAACACCAGATACTCCAAAAGAGAGTCCCATTGTACAGTTAGTTCAAGAGG
AGGAAGAGGAGGCAAGTCCATCTACAGTGACCCTTCTGGGCAGCGGTGAACAGGAAGATGAATCATCACC
CTGGTTTGAGTCAGAGACACAAATATTTTGCAGTGAACTGACCACAATTTGTTGTATTTCTAGTTTTTCA
GAATACATATATAAATGGTGTTCAGTTAGAGTTGCTCTTTATCGGCAGCGCAGCCGAACTGCTTTGAGTA
AAGGAAAAGATTATCTTGTGTTAGCTCAACCACCCTTACTACTTCCTGCGGAATCAGTAGATGTTTCAGT
ATTGCAACCTCTGAGTGGAGAATTGGAAAATACGAATATAGAAAGGGAAGCTGAAACTGTTGTTCTGGGT
GATTTAAGTAGTAGTATGCACCAGGATGACTTGGTGAATCACACTGTAGATGCAGTTGAACTTGAACCAA
GCCATTCTCAAACTCTTTCTCAGTCTCTTCTTTTAGATATTACCCCAGAAATCAATCCCTTGCCTAAAAT
AGAAGTATCTGAGTCTGTTGAATATGAGGCAGGACATATACCATCACCAGTGATTCCCCAAGAGAGTTCT
GTTGAGATCGATAATGAAACAGAACAAAAGTCTGAGAGCTTTAGTTCTATAGAGAAACCATCTATTACCT
ATGAAACAAATAAAGTTAATGAGTTAATGGATAATATTATAAAAGAAGATGTGAACTCCATGCAAATTTT
CACAAAGCTGTCTGAAACAATAGTGCCACCAATAAATACAGCCACTGTACCCGACAATGAAGATGGGGAA
GCCAAAATGAATATAGCTGACACAGCAAAGCAAACTTTGATTTCTGTTGTGGATTCTTCTTCATTACCTG
AAGTAAAAGAAGAAGAACAGTCTCCAGAAGATGCCCTTTTGAGAGGGTTACAGAGGACAGCTACAGATTT
TTATGCTGAATTGCAAAATTCTACAGATCTAGGATATGCTAATGGAAATCTTGTACATGGATCAAACCAA
AAGGAGTCAGTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAGTGGTC
GCTATCTGGAGGAGCTTAGCCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCAATAAAAC
AATCGTGAAACTTCAGAATACTTCAAGAATAGCAGAGGAGCAGGATCAGCGGCAAACTGAAGCCATCCAG
TTGCTACAGGCACAGCTGACCAACATGACACAGCTTGTTTCAAATTTATCAGCAACAGTAGCAGAATTGA
AACGGGAGGTTTCAGATCGACAAAGCTATCTTGTCATATCTTTGGTTCTTTGTGTTGTCTTGGGACTGAT
GCTTTGTATGCAGCGTTGTCGAAATACTTCTCAATTTGATGGAGATTATATTTCAAAACTTCCTAAAAGT
AATCAGTATCCAAGCCCTAAAAGGTGTTTCTCTTCCTATGATGATATGAATTTGAAAAGAAGAACTTCAT
TCCCACTCATGAGATCCAAGTCTCTACAGTTAACTGGCAAAGAAGTAGACCCAAATGATTTGTACATTGT
AGAACCCCTCAAGTTTTCTCCAGAAAAGAAGAAGAAGCGCTGCAAGTACAAAATTGAAAAAATTGAGACC
ATAAAGCCTGAAGAACCATTGCACCCCATAGCCAATGGCGACATAAAAGGAAGAAAGCCCTTTACGAACC
AGAGAGATTTTTCTAATATGGGAGAAGTTTATCACTCTTCTTATAAAGGTCCTCCATCTGAAGGAAGCTC
AGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGCACAAGTCTGTGCAATGGA
CAGTCTCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGACGATCTAAAGTCCAAGACCAAGGAA
AATTGATAAAAACTCTAATACAGACTAAGTCGGGATCATTGCCGAGCCTGCATGACATAATCAAAGGAAA
CAAAGAGATCACCGTGGGAACATTTGGTGTTACAGCAGTCTCGGGACATATCTAA

Translation (1254 aa):
MKKHRRALALVSCLFLCSLVWLPSWRVCCKESSSASASSYYSQDDNCALENEDVQFQKKDEREGPINAES
LGKSGSNLPISPKEHKLKDDSIVDVQNTESKKLSPPVVETLPTVDLHEESSNAVVDSETVENISSSSTSE
ITPISKLDEIEKSGTIPIAKPSETEQSETDCDVGEALDASAPIEQPSFVSPPDSLVGQHIENVSSSHGKG
KITKSEFESKVSASEQGGGDPKSALNASDNLKNESSDYTKPGDIDPTSVASPKDPEDIPTFDEWKKKVME
VEKEKSQSMHASSNGGSHATKKVQKNRNNYASVECGAKILAANPEAKSTSAILIENMDLYMLNPCSTKIW
FVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKWIKLGTFHGRDERNVQSFPLDEQMYAKYV
KMFIKYIKVELLSHFGSEHFCPLSLIRVFGTSMVEEYEEIADSQYHSERQELFDEDYDYPLDYNTGEDKS
SKNLLGSATNAILNMVNIAANILGAKTEDLTEGNKSISENATATAAPKMPESTPVSTPVPSPEYVTTEVH
THDMEPSTPDTPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSPWFESETQIFCSELTTICCISSFS
EYIYKWCSVRVALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLSGELENTNIEREAETVVLG
DLSSSMHQDDLVNHTVDAVELEPSHSQTLSQSLLLDITPEINPLPKIEVSESVEYEAGHIPSPVIPQESS
VEIDNETEQKSESFSSIEKPSITYETNKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGE
AKMNIADTAKQTLISVVDSSSLPEVKEEEQSPEDALLRGLQRTATDFYAELQNSTDLGYANGNLVHGSNQ
KESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQDQRQTEAIQ
LLQAQLTNMTQLVSNLSATVAELKREVSDRQSYLVISLVLCVVLGLMLCMQRCRNTSQFDGDYISKLPKS
NQYPSPKRCFSSYDDMNLKRRTSFPLMRSKSLQLTGKEVDPNDLYIVEPLKFSPEKKKKRCKYKIEKIET
IKPEEPLHPIANGDIKGRKPFTNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNG
QSQKTKTEKRALKRRRSKVQDQGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTAVSGHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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