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Report for CCDS12980.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12980.1 Public Homo sapiens 19 ZNF132 24 110 108 CCDS HistoryNCBI Gene:7691Re-query CCDS DB by CCDS ID:12980.1Re-query CCDS DB by GeneID:7691See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12980.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254166.4 ENSP00000254166.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254166.4Link to Ensembl Protein Viewer:ENSP00000254166.2Re-query CCDS DB by Nucleotide ID:ENST00000254166Re-query CCDS DB by Protein ID:ENSP00000254166
Original member Current member NCBI NM_003433.4 NP_003424.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003433.4Link to Protein Sequence:NP_003424.3Re-query CCDS DB by Nucleotide ID:NM_003433Re-query CCDS DB by Protein ID:NP_003424Link to BLAST:NP_003424.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003424.3 706 P52740-1 706 100% 0 0

Chromosomal Locations for CCDS 12980.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58433323 58435211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58437047 58437215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58439759 58439821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGGCCCTGCCCAGCCCACAGGTTCTAATGGGGTTGCCAGCGTTGCTGATGGGCCCGGCGCAGCATACTT
CT
TGGCCCTGTGGCTCAGCTGTCCCCACATTGAAGAGCATGGTAACCTTTGAAGATGTGGCTGTATACTT
C
TCCCAAGAGGAGTGGGAGCTCCTTGATGCAGCCCAGAGGCACCTGTACCACAGTGTGATGCTGGAAAAC
CTT
GAGCTTGTGACCTCACTTGGTTCTTGGCATGGAGTAGAGGGTGAGGGGGCCCATCCCAAGCAGAATG
TT
TCTGTAGAAGTGTTACAGGTCAGGATCCCTAATGCAGATCCTTCCACCAAGAAAGCTAACTCCTGTGA
C
ATGTGTGGGCCATTCTTGAAAGACATTTTGCACCTGGCTGAGCATCAGGGAACACAGTCTGAGGAGAAA
CCC
TACACATGTGGAGCATGTGGGAGAGACTTTTGGTTGAATGCAAACCTTCACCAGCACCAGAAGGAGC
AC
AGTGGAGGGAAGCCCTTTAGATGGTACAAGGACAGGGACGCACTTATGAAGAGCTCTAAAGTCCACCT
G
TCAGAGAACCCCTTCACTTGCAGGGAAGGTGGGAAGGTCATCCTGGGCAGCTGTGACCTCCTCCAGCTT
CAA
GCTGTTGACAGTGGGCAGAAGCCATATTCCAATCTTGGGCAGCTTCCAGAAGTCTGTACCACACAGA
AA
CTCTTCGAGTGCAGCAACTGTGGAAAAGCCTTCCTGAAGAGCTCCACTCTCCCCAACCATCTGAGAAC
T
CACTCTGAAGAGATACCATTTACATGCCCAACAGGTGGAAATTTCTTAGAGGAGAAATCAATCCTTGGT
AAT
AAAAAGTTTCACACTGGGGAAATACCCCATGTGTGTAAGGAGTGTGGGAAGGCCTTTAGTCACTCAT
CT
AAGCTGAGGAAGCACCAGAAATTTCACACTGAAGTAAAATATTATGAGTGCATTGCATGTGGGAAAAC
C
TTCAACCACAAACTCACATTTGTTCATCATCAGAGAATTCACTCAGGAGAAAGACCTTATGAGTGTGAT
GAA
TGTGGGAAAGCCTTCAGTAACAGATCACACCTCATTCGGCATGAGAAAGTTCACACTGGAGAAAGGC
CT
TTTGAGTGCCTGAAATGTGGAAGAGCCTTCAGCCAAAGCTCCAATTTCCTTCGGCATCAGAAAGTTCA
C
ACACAGGTAAGACCTTATGAGTGCAGTCAATGTGGTAAATCCTTCAGCCGAAGCTCTGCTCTCATTCAG
CAC
TGGAGAGTTCACACTGGAGAAAGACCGTATGAATGCAGTGAATGTGGAAGAGCTTTTAACAATAACT
CC
AACCTTGCTCAGCACCAGAAAGTTCACACCGGAGAACGGCCTTTTGAGTGCAGTGAATGTGGAAGAGA
C
TTCAGCCAAAGCTCCCATCTCCTTCGACATCAGAAAGTTCACACTGGAGAACGGCCTTTTGAATGCTGT
GAT
TGTGGTAAAGCCTTCAGTAATAGCTCCACCCTCATCCAGCACCAGAAAGTACATACTGGGCAAAGGC
CT
TATGAGTGCAGCGAATGTAGGAAATCCTTCAGCCGCAGCTCCAGCCTGATTCAGCACTGGAGAATTCA
C
ACTGGAGAAAAGCCTTACGAGTGTAGTGAGTGTGGGAAAGCCTTTGCTCACAGCTCCACTCTCATTGAA
CAC
TGGAGAGTTCACACAAAAGAAAGGCCTTATGAGTGCAATGAATGTGGGAAATTCTTTAGCCAAAACT
CC
ATTCTCATTAAGCATCAGAAAGTTCATACTGGAGAAAAGCCTTATAAATGCAGTGAATGTGGGAAATT
C
TTTAGCCGAAAATCCAGCCTTATTTGTCACTGGAGAGTTCACACTGGAGAAAGGCCTTACGAATGCAGT
GAA
TGTGGGAGAGCCTTTAGCAGTAACTCCCACCTGGTTCGTCATCAGAGAGTTCACACACAAGAAAGGC
CC
TATGAGTGCATCCAGTGTGGAAAAGCCTTTAGTGAAAGATCTACACTTGTTCGGCACCAGAAAGTTCA
C
ACCAGAGAAAGGACTTATGAGTGTAGCCAGTGTGGGAAACTCTTCAGCCATCTTTGTAACCTTGCACAG
CAT
AAAAAGATTCATACCTGA


Translation (706 aa):
MALPSPQVLMGLPALLMGPAQHTSWPCGSAVPTLKSMVTFEDVAVYFSQEEWELLDAAQRHLYHSVMLEN
L
ELVTSL
GSWHGVEGEGAHPKQNVSVEVLQVRIPNADPSTKKANSCDMCGPFLKDILHLAEHQGTQSEEK
P
YTCGACGRDFWLNANLHQHQKEHSGGKPFRWYKDRDALMKSSKVHLSENPFTCREGGKVILGSCDLLQL
Q
AVDSGQKPYSNLGQLPEVCTTQKLFECSNCGKAFLKSSTLPNHLRTHSEEIPFTCPTGGNFLEEKSILG
N
KKFHTGEIPHVCKECGKAFSHSSKLRKHQKFHTEVKYYECIACGKTFNHKLTFVHHQRIHSGERPYECD
E
CGKAFSNRSHLIRHEKVHTGERPFECLKCGRAFSQSSNFLRHQKVHTQVRPYECSQCGKSFSRSSALIQ
H
WRVHTGERPYECSECGRAFNNNSNLAQHQKVHTGERPFECSECGRDFSQSSHLLRHQKVHTGERPFECC
D
CGKAFSNSSTLIQHQKVHTGQRPYECSECRKSFSRSSSLIQHWRIHTGEKPYECSECGKAFAHSSTLIE
H
WRVHTKERPYECNECGKFFSQNSILIKHQKVHTGEKPYKCSECGKFFSRKSSLICHWRVHTGERPYECS
E
CGRAFSSNSHLVRHQRVHTQERPYECIQCGKAFSERSTLVRHQKVHTRERTYECSQCGKLFSHLCNLAQ
H
KKIHT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser