Ivan Ovcharenko Research Group at NCBI

	Computational Biology Branch

	Ivan Ovcharenko Research Group


Research Projects	Publications	Collaborations	Resources	Group Members	Principal Investigator	Visiting us

Collaborative Projects
	Dr. Len Pennacchio Lawrence Berkeley National Laboratory	Forebrain gene regulation. Computational analysis of sequence motifs specific to forebrain enhancers. Transgenic mouse experimentation.
	Dr. Gabriela Loots Lawrence Livermore National Laboratory	Bone development. Identification of bone development genes and gene regulatory elements. Characterization of limb, cartilage, and bone enhancer elements in transgenic frog, Xenopus tropicalis.
	Dr. John Rubenstein University of California, San Francisco	Forebrain development. Reconstruction of forebrain gene regulatory networks. Identification of upstream regulators responsible for the initiation of regulatory cascades in different sub-domains of the forebrain.
	Dr. David Klein NICHD, NIH	Pineal gland development. Using microarray data to identify enhancer elements and key transcription factors playing role in the pineal gland development.
	Dr. Marcelo Nobrega University of Chicago	Heart regulatory code. Coupled computational identification and experimental validation of gene regulatory elements partaking in heart development. Transgenic zebrafish experimentation.
	Dr. Laura Elnitski NHGRI, NIH	Gene expression repressors. Identification of regulatory elements with repressor function in the human genome. Experimental validation of predicted liver repressors in Hep G2 cell lines.
	Dr. Webb Miller Penn State University	Genome evolution. Development of software resources for evolutionary studies. Comparative genomics analysis of variable gene desert evolution in eukaryotic genomes.
	Dr. John Spouge NCBI, NIH	Sequence pattern analysis. Development of computational methods to identify specific sequence patterns in gene regulatory elements with shared biological functions.

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Last modified: April 22, 2009