From Table IIIa: Position-dependent hexamers: Clustered hexamers

CGCGTA and/or TACGCG are found in the upstream regions of these late_g1 yeast genes in the following intervals:

-551 to -600 nt upstream of the ATG start codon
0 elements found in 0 genes

-501 to -550 nt upstream of the ATG start codon
0 elements found in 0 genes

-451 to -500 nt upstream of the ATG start codon
2 elements found in 2 genes

• YER070W	RNR1	ribonucleotide reductase

• YML027W	YOX1	Homeobox-domain containing protein

-401 to -450 nt upstream of the ATG start codon
4 elements found in 3 genes

• YER070W	RNR1	ribonucleotide reductase

• YGR109C	CLB6	B-type cyclin

• YLR326W		

-351 to -400 nt upstream of the ATG start codon
3 elements found in 3 genes

• YDL127W	PCL2	G1 cyclin

• YGR109C	CLB6	B-type cyclin

• YLR382C	NAM2	mitochondrial leucyl tRNA synthetase

-301 to -350 nt upstream of the ATG start codon
2 elements found in 2 genes

• YBR071W		

• YER070W	RNR1	ribonucleotide reductase

-251 to -300 nt upstream of the ATG start codon
5 elements found in 5 genes

• YAR007C	RFA1	69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1

• YBR071W		

• YDR507C	GIN4	putative serine/threonine kinase

• YPL014W		

• YPL153C	RAD53	protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation

-201 to -250 nt upstream of the ATG start codon
3 elements found in 3 genes

• YBL035C	POL12	B subunit of DNA polymerase alpha-primase complex

• YDL018C	ERP3	p24 protein involved in membrane trafficking

• YKL042W	SPC42	component of the spindle pole body

-151 to -200 nt upstream of the ATG start codon
16 elements found in 14 genes

• YAR003W		beta transducin domain

• YAR007C	RFA1	69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1

• YBR070C		involved in osmotolerance

• YBR088C	POL30	profilerating cell nuclear antigen (PCNA); accessory factor for DNA polymerase delta, mRNA increases in G1, peaks in S in mitosis, and increases prior to DNA synthesis in meiosis

• YCL024W		Ser/Thr protein kinase

• YDL156W		

• YDR097C	MSH6	Homolog of the human GTBP protein, forms a complex with Msh2p to repair both single-base and insertion-deletion mispairs, redundant with Msh3p in repair of insertion-deletion mispairs

• YKL045W	PRI2	p58 polypeptide of DNA primase

• YLR103C	CDC45	omosomal DNA replication initiation protein

• YLR313C	SPH1	homologous to Spa2p, localizes to sites of polarized growth

• YLR383W	RHC18	involved in recombination repair

• YNL309W	STB1	Interacts with the putative transcription factor Sin3p

• YOL017W		

• YMR076C	PDS5	(putative) involved in sister chromosome cohesion during mitosis

-101 to -150 nt upstream of the ATG start codon
17 elements found in 15 genes

• YDL103C	QRI1	UDP-N-acetylglucosamine pyrophosphorylase

• YFL008W	SMC1	omosome segregation protein

• YGL027C	CWH41	glucosidase I

• YIL026C	IRR1	involved in cell morphology

• YJR043C	POL32	third (55 kDa) subunit of DNA polymerase delta

• YKL045W	PRI2	p58 polypeptide of DNA primase

• YKL108W	SLD2	Synthetically lethal with dpb11-1; required for DNA replication

• YKL113C	RAD27	42 kDa 5' to 3' exonuclease required for Okazaki fragment processing

• YLR032W	RAD5	putative ATPase/DNA helicase

• YLR376C		

• YLR381W		

• YNL262W	POL2	DNA polymerase II

• YNL273W	TOF1	Interacts with topoisomerase I

• YOR144C		

• YPL267W		

-51 to -100 nt upstream of the ATG start codon
4 elements found in 4 genes

• YBR252W	DUT1	dUTP pyrophosphatase (dUTPase)

• YBR278W	DPB3	C and C' subunits of DNA polymerase II

• YJL173C	RFA3	subunit 3 of replication factor-A

• YML021C	UNG1	uracil DNA glycosylase

-1 to -50 nt upstream of the ATG start codon
1 elements found in 1 genes

• YJL181W