Positioning of AACGCG

From Table IIIb: Position-dependent hexamers: Clustered hexamers
AACGCG is found in the upstream regions of these late_g1 yeast genes in the following intervals:

-551 to -600 nt upstream of the ATG start codon
0 elements found in 0 genes

-501 to -550 nt upstream of the ATG start codon
3 elements found in 3 genes

YJL078C	PRY3	Similar to plant PR-1 class of pathogen related proteins

YLL022C	HIF1	interacts with histone acetyltransferase

```
YPL256C	CLN2	G(sub)1 cyclin
```

-451 to -500 nt upstream of the ATG start codon
1 elements found in 1 genes

YML027W	YOX1	Homeobox-domain containing protein

-401 to -450 nt upstream of the ATG start codon
4 elements found in 4 genes

YDR297W	SUR2	Syringomycin response protein 2

```
YER070W	RNR1	ribonucleotide reductase
```
```
YPR120C	CLB5	B-type cyclin
```

YPR175W	DPB2	DNA polymerase epsilon, subunit B

-351 to -400 nt upstream of the ATG start codon
3 elements found in 3 genes

YDL003W	MCD1	involved in mitosis, similar to pombe Rad21

```
YER070W	RNR1	ribonucleotide reductase
```
```
YGR109C	CLB6	B-type cyclin
```

-301 to -350 nt upstream of the ATG start codon
1 elements found in 1 genes

YDR507C	GIN4	putative serine/threonine kinase

-251 to -300 nt upstream of the ATG start codon
1 elements found in 1 genes

YGR152C	RSR1	GTP-binding protein, ras superfamily

-201 to -250 nt upstream of the ATG start codon
5 elements found in 5 genes

YBR088C	POL30	profilerating cell nuclear antigen (PCNA); accessory factor for DNA polymerase delta, mRNA increases in G1, peaks in S in mitosis, and increases prior to DNA synthesis in meiosis

```
YLR183C		
```

YML027W	YOX1	Homeobox-domain containing protein

YMR179W	SPT21	non-specific DNA binding protein

YNL102W	POL1	DNA polymerase I alpha subunit, p180

-151 to -200 nt upstream of the ATG start codon
14 elements found in 14 genes

YBR073W	RDH54	Putative helicase similar to RAD54

YBR088C	POL30	profilerating cell nuclear antigen (PCNA); accessory factor for DNA polymerase delta, mRNA increases in G1, peaks in S in mitosis, and increases prior to DNA synthesis in meiosis

```
YCL024W		Ser/Thr protein kinase
```
```
YDL010W		
```

YDL018C	ERP3	p24 protein involved in membrane trafficking

YDR097C	MSH6	Homolog of the human GTBP protein, forms a complex with Msh2p to repair both single-base and insertion-deletion mispairs, redundant with Msh3p in repair of insertion-deletion mispairs

YKL113C	RAD27	42 kDa 5' to 3' exonuclease required for Okazaki fragment processing

```
YKR077W		
```

YLR103C	CDC45	omosomal DNA replication initiation protein

YLR313C	SPH1	homologous to Spa2p, localizes to sites of polarized growth

YLR383W	RHC18	involved in recombination repair

YNL102W	POL1	DNA polymerase I alpha subunit, p180

```
YOL017W		
```

YOL090W	MSH2	MutS homolog encoding major mismatch repair activity in mitosis and meiosis.

-101 to -150 nt upstream of the ATG start codon
20 elements found in 17 genes

YDL018C	ERP3	p24 protein involved in membrane trafficking

```
YDL105W	QRI2	
```
```
YDL164C	CDC9	DNA ligase
```

YFL008W	SMC1	omosome segregation protein

```
YHR153C	SPO16	sporulation protein
```

YIL026C	IRR1	involved in cell morphology

YJR043C	POL32	third (55 kDa) subunit of DNA polymerase delta

YKL113C	RAD27	42 kDa 5' to 3' exonuclease required for Okazaki fragment processing

YKL165C	MCD4	(putative) involved in cell polarity

```
YKR083C		
```

YLR212C	TUB4	gamma tubulin-like protein, interacts with Spc98p and Spc97p, the Tub4p-Spc98p-Spc97p complex may be part of the microtubule attachment site at the spindle pole body

```
YLR234W	TOP3	DNA Topoisomerase III
```
```
YNL262W	POL2	DNA polymerase II
```

YNL312W	RFA2	subunit 2 of replication factor RF-A; 29% identical to the human p34 subunit of RF-A

```
YOR144C		
```

YPL124W	NIP29	spindle pole body associated protein

```
YPR174C		
```

-51 to -100 nt upstream of the ATG start codon
5 elements found in 5 genes

YBR073W	RDH54	Putative helicase similar to RAD54

```
YDR013W		
```
```
YML021C	UNG1	uracil DNA glycosylase
```
```
YPL208W		
```

YPL241C	CIN2	involved in microtubule function

-1 to -50 nt upstream of the ATG start codon
2 elements found in 2 genes

YNL082W	PMS1	MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch

```
YPR120C	CLB5	B-type cyclin
```

From Table IIIb: Position-dependent hexamers: Clustered hexamers AACGCG is found in the upstream regions of these late_g1 yeast genes in the following intervals:

From Table IIIb: Position-dependent hexamers: Clustered hexamers
AACGCG is found in the upstream regions of these late_g1 yeast genes in the following intervals: