Position dependent TAATA

From Table IIb: Position-dependent, orientation-dependent pentamers
TAATA
is found in the upstream regions of these cell cycle-regulated yeast genes in the following intervals:

early_g1: -598 to -500 nt upstream of the ATG start codon: 6 genes

```
YBR053C		
```
```
YBR157C		
```

YEL032W	MCM3	component of DNA replication initiator complex

YJL194W	CDC6	pre-initiation complex component

YKL150W	MCR1	NADH-cytochrome b5 reductase

```
YNR067C		
```

early_g1: -499 to -401 nt upstream of the ATG start codon: 7 genes

```
YGR035C		
```
```
YHR022C		RAS-related protein
```
```
YIL009W	FAA3	Acyl CoA synthase
```

YLR395C	COX8	Cytochrome-c oxidase chain VIII

```
YMR254C		
```
```
YOR066W		
```
```
YPL158C		
```

early_g1: -400 to -302 nt upstream of the ATG start codon: 13 genes

```
YBR053C		
```
```
YBR200W	BEM1	contains two SH3 domains
```

YBR202W	CDC47	MCM3 protein homolog (S. cerevisiae)

```
YER111C	SWI4	transcription factor
```

YGL055W	OLE1	delta-9-fatty acid desaturase

YGR183C	QCR9	7.3 kDa subunit 9 of the ubiquinol cytochrome c oxidoreductase complex

YJL194W	CDC6	pre-initiation complex component

YKL185W	ASH1	probable purine nucleotide-binding protein

```
YLR050C		
```

YLR274W	CDC46	MCM initiator complex protein

```
YNL078W		
```
```
YOR065W	CYT1	Cytochrome c1
```
```
YOR066W		
```

early_g1: -301 to -203 nt upstream of the ATG start codon: 13 genes

YBL023C	MCM2	Minichromosome maintenance protein, transcription factor

YBR054W	YRO2	Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7

```
YBR157C		
```

YBR202W	CDC47	MCM3 protein homolog (S. cerevisiae)

```
YDL117W		
```
```
YER111C	SWI4	transcription factor
```

YGL055W	OLE1	delta-9-fatty acid desaturase

```
YGR035C		
```

YGR183C	QCR9	7.3 kDa subunit 9 of the ubiquinol cytochrome c oxidoreductase complex

YLL040C	VPS13	component of peripheral vacuolar membrane protein complex

YLR079W	SIC1	Cdc28p-Clb5 protein kinase inhibitor

```
YMR007W		
```
```
YOR066W		
```

early_g1: -202 to -104 nt upstream of the ATG start codon: 14 genes

YBR052C		Homolog to YCR004, obr1 (S. pombe), trp repressor binding protein (E. coli)

YBR054W	YRO2	Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7

```
YBR067C	TIP1	cell wall mannoprotein
```
```
YBR158W		
```
```
YBR200W	BEM1	contains two SH3 domains
```
```
YDL117W		
```
```
YDR033W		
```
```
YDR511W		
```
```
YJL157C	FAR1	Cdc28p kinase inhibitor
```
```
YLR050C		
```
```
YLR254C		
```
```
YML109W	ZDS2	Zds1 homolog
```

YML110C	COQ5	Putative mitochondrial C-methyltransferase

YPL058C	PDR12	multidrug resistance transporter

early_g1: -103 to -5 nt upstream of the ATG start codon: 21 genes

YBL023C	MCM2	Minichromosome maintenance protein, transcription factor

YBR054W	YRO2	Homolog to HSP30 heat shock protein YRO1 (S. cerevisiae) 7

```
YBR157C		
```
```
YBR158W		
```
```
YBR200W	BEM1	contains two SH3 domains
```
```
YBR231C		
```
```
YCL040W	GLK1	Glucokinase
```
```
YDL179W	PCL9	Cyclin
```
```
YDR033W		
```

YDR368W	YPR1	similar to aldo-keto reductase

YGL055W	OLE1	delta-9-fatty acid desaturase

```
YGR281W	YOR1	ABC transporter
```

YKL150W	MCR1	NADH-cytochrome b5 reductase

YKL185W	ASH1	probable purine nucleotide-binding protein

```
YLR254C		
```

YLR273C	PIG1	Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit

YMR256C	COX7	subunit VII of cytochrome c oxidase

YNR001C	CIT1	citrate synthase. Nuclear encoded mitochondrial protein.

```
YNR016C	ACC1	acetyl-CoA carboxylase
```
```
YOR065W	CYT1	Cytochrome c1
```

YPL058C	PDR12	multidrug resistance transporter

late_g1: -598 to -500 nt upstream of the ATG start codon: 13 genes

```
YBR071W		
```

YDL003W	MCD1	involved in mitosis, similar to pombe Rad21

```
YDL156W		
```

YFL008W	SMC1	omosome segregation protein

YIL026C	IRR1	involved in cell morphology

YIL159W	BNR1	involved in actin filament organization

```
YJL181W		
```

YKL165C	MCD4	(putative) involved in cell polarity

YLL022C	HIF1	interacts with histone acetyltransferase

```
YLR183C		
```

YML027W	YOX1	Homeobox-domain containing protein

YOL090W	MSH2	MutS homolog encoding major mismatch repair activity in mitosis and meiosis.

```
YCL061C		
```

late_g1: -499 to -401 nt upstream of the ATG start codon: 18 genes

YBL035C	POL12	B subunit of DNA polymerase alpha-primase complex

```
YBR071W		
```
```
YCL022C		
```
```
YCL024W		Ser/Thr protein kinase
```
```
YDL105W	QRI2	
```
```
YDL119C		
```

YDR309C	GIC2	Cdc42 binding protein, involved in bud emergence

```
YDR383C		
```

YGR041W	BUD9	involved in bud-site selection

YGR152C	RSR1	GTP-binding protein, ras superfamily

```
YJL196C	ELO1	Elongation enzyme 1
```

YKL165C	MCD4	(putative) involved in cell polarity

YLL022C	HIF1	interacts with histone acetyltransferase

```
YLR326W		
```

YMR078C	CTF18	(putative) involved in chromosome transmission during mitosis

YNL233W	BNI4	Is required to link Chs3p and Chs4p to the septins

YNL272C	SEC2	GDP/GTP exchange factor for Sec4p

YNL273W	TOF1	Interacts with topoisomerase I

late_g1: -400 to -302 nt upstream of the ATG start codon: 19 genes

```
YAR003W		beta transducin domain
```

YAR007C	RFA1	69 kDa subunit of the heterotrimeric RPA (RF-A) single-stranded DNA binding protein, binds URS1 and CAR1

YBL035C	POL12	B subunit of DNA polymerase alpha-primase complex

```
YCL022C		
```

YDR297W	SUR2	Syringomycin response protein 2

YFL008W	SMC1	omosome segregation protein

```
YHR039C		Aldehyde dehydrogenases
```

YKL042W	SPC42	component of the spindle pole body

YKL101W	HSL1	Putative protein kinase homologous to S. pombe cdr1/nim1

YLR032W	RAD5	putative ATPase/DNA helicase

```
YLR286C	CTS1	Endochitinase
```
```
YLR326W		
```

YML060W	OGG1	43-kDa 8-oxo-guanine DNA glycosylase

YNL225C	CNM67	Spindle pole body protein involved in nuclear migration

YOR317W	FAA1	long chain fatty acyl:CoA synthetase

YPL153C	RAD53	protein kinase, Mec1p and Tel1p regulate rad53p phosphorylation

```
YLR236C		
```

YMR076C	PDS5	(putative) involved in sister chromosome cohesion during mitosis

YMR076C	PDS5	(putative) involved in sister chromosome cohesion during mitosis

late_g1: -301 to -203 nt upstream of the ATG start codon: 24 genes

```
YBR070C		involved in osmotolerance
```

YBR252W	DUT1	dUTP pyrophosphatase (dUTPase)

```
YCL024W		Ser/Thr protein kinase
```
```
YDL101C	DUN1	protein kinase
```

YDL103C	QRI1	UDP-N-acetylglucosamine pyrophosphorylase

```
YDR383C		
```
```
YGL027C	CWH41	glucosidase I
```

YIL159W	BNR1	involved in actin filament organization

```
YJL018W		
```

YJL074C	SMC3	involved in sister chromatid cohesion

YJR043C	POL32	third (55 kDa) subunit of DNA polymerase delta

```
YLR183C		
```

YLR212C	TUB4	gamma tubulin-like protein, interacts with Spc98p and Spc97p, the Tub4p-Spc98p-Spc97p complex may be part of the microtubule attachment site at the spindle pole body

YLR233C	EST1	involved in telomere length regulation

```
YLR326W		
```

YLR382C	NAM2	mitochondrial leucyl tRNA synthetase

YML060W	OGG1	43-kDa 8-oxo-guanine DNA glycosylase

YNL082W	PMS1	MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch

YNL225C	CNM67	Spindle pole body protein involved in nuclear migration

```
YNL262W	POL2	DNA polymerase II
```
```
YOL017W		
```
```
YOR144C		
```

YPL124W	NIP29	spindle pole body associated protein

```
YPL187W	MF(ALPHA)1	mating factor alpha
```

late_g1: -202 to -104 nt upstream of the ATG start codon: 31 genes

YBL035C	POL12	B subunit of DNA polymerase alpha-primase complex

```
YBR071W		
```

YDL103C	QRI1	UDP-N-acetylglucosamine pyrophosphorylase

```
YDL156W		
```
```
YER070W	RNR1	ribonucleotide reductase
```

YGR152C	RSR1	GTP-binding protein, ras superfamily

YJL173C	RFA3	subunit 3 of replication factor-A

YJR148W	BAT2	Branched-Chain Amino Acid Transaminase

YKL042W	SPC42	component of the spindle pole body

YKL101W	HSL1	Putative protein kinase homologous to S. pombe cdr1/nim1

YKL165C	MCD4	(putative) involved in cell polarity

```
YKR077W		
```
```
YKR083C		
```

YLL002W	KIM2	diepoxybutane and mitomycin C resistance

YLR103C	CDC45	omosomal DNA replication initiation protein

YLR121C	YPS4	GPI-anchored aspartic protease

YLR212C	TUB4	gamma tubulin-like protein, interacts with Spc98p and Spc97p, the Tub4p-Spc98p-Spc97p complex may be part of the microtubule attachment site at the spindle pole body

YLR313C	SPH1	homologous to Spa2p, localizes to sites of polarized growth

```
YLR381W		
```

YNL082W	PMS1	MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch

YNL173C	MDG1	Involved in G-protein mediated signal transduction

YNL233W	BNI4	Is required to link Chs3p and Chs4p to the septins

YNL272C	SEC2	GDP/GTP exchange factor for Sec4p

```
YNL303W		
```

YOL090W	MSH2	MutS homolog encoding major mismatch repair activity in mitosis and meiosis.

```
YOR074C	CDC21	Thymidylate synthase
```

YPL057C	SUR1	Multicopy suppressor of cls2-2; also suppresses rvs161 mutations

YPL124W	NIP29	spindle pole body associated protein

YPL241C	CIN2	involved in microtubule function

```
YPL256C	CLN2	G(sub)1 cyclin
```
```
YLR236C		
```

late_g1: -103 to -5 nt upstream of the ATG start codon: 50 genes

```
YAR003W		beta transducin domain
```

YBL035C	POL12	B subunit of DNA polymerase alpha-primase complex

```
YBR070C		involved in osmotolerance
```

YBR073W	RDH54	Putative helicase similar to RAD54

YBR252W	DUT1	dUTP pyrophosphatase (dUTPase)

YBR278W	DPB3	C and C' subunits of DNA polymerase II

```
YCL024W		Ser/Thr protein kinase
```
```
YDL010W		
```
```
YDL105W	QRI2	
```

YDR097C	MSH6	Homolog of the human GTBP protein, forms a complex with Msh2p to repair both single-base and insertion-deletion mispairs, redundant with Msh3p in repair of insertion-deletion mispairs

YDR507C	GIN4	putative serine/threonine kinase

```
YGL027C	CWH41	glucosidase I
```
```
YGL028C	SCW11	soluble cell wall protein
```

YGL200C	EMP24	type I transmemebrane protein, component of COPII-coated, ER-derived transport vesicles

```
YGR109C	CLB6	B-type cyclin
```

YGR152C	RSR1	GTP-binding protein, ras superfamily

```
YHR039C		Aldehyde dehydrogenases
```

YHR110W	ERP5	p24 protein involved in membrane trafficking

YIL026C	IRR1	involved in cell morphology

YJL074C	SMC3	involved in sister chromatid cohesion

YJR043C	POL32	third (55 kDa) subunit of DNA polymerase delta

YJR148W	BAT2	Branched-Chain Amino Acid Transaminase

YKL042W	SPC42	component of the spindle pole body

YKL101W	HSL1	Putative protein kinase homologous to S. pombe cdr1/nim1

YKR013W	PRY2	Similar to plant PR-1 class of pathogen related proteins

YLR103C	CDC45	omosomal DNA replication initiation protein

```
YLR183C		
```

YLR212C	TUB4	gamma tubulin-like protein, interacts with Spc98p and Spc97p, the Tub4p-Spc98p-Spc97p complex may be part of the microtubule attachment site at the spindle pole body

```
YLR286C	CTS1	Endochitinase
```
```
YLR376C		
```
```
YLR381W		
```

YLR383W	RHC18	involved in recombination repair

```
YLR457C	NBP1	Nap1p binding protein
```
```
YML061C	PIF1	5' to 3' DNA helicase
```
```
YMR199W	CLN1	G(sub)1 cyclin
```

YNL082W	PMS1	MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch

YNL173C	MDG1	Involved in G-protein mediated signal transduction

YNL225C	CNM67	Spindle pole body protein involved in nuclear migration

YNL233W	BNI4	Is required to link Chs3p and Chs4p to the septins

YNL273W	TOF1	Interacts with topoisomerase I

YNL289W	PCL1	G(sub)1 cyclin that associates with PHO85

```
YNL300W		
```

YNL312W	RFA2	subunit 2 of replication factor RF-A; 29% identical to the human p34 subunit of RF-A

YOL007C	CSI2	Appears to be a structural component of the chitin synthase 3 complex

```
YPL014W		
```

YPL124W	NIP29	spindle pole body associated protein

```
YPL127C	HHO1	histone H1
```
```
YPR120C	CLB5	B-type cyclin
```

YPR175W	DPB2	DNA polymerase epsilon, subunit B

```
YLR236C		
```

s: -598 to -500 nt upstream of the ATG start codon: 13 genes

YAL001C	TFC3	transcription factor tau (TFIIIC) subunit 138

YBL003C	HTA2	Histone H2A (HTA1 and HTA2 code for nearly identical proteins)

YBR275C	RIF1	RAP1-interacting factor, involved in establishment of repressed chromatin

YCR035C	RRP43	Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p).

```
YDL094C		
```
```
YDR219C		
```

YFR027W	ECO1	involved in establishment of cohesion between sister chromatids

YHR172W	SPC97	spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP

YJR137C	ECM17	Putative sulfite reductase

YKR001C	VPS1	putative GTP-binding protein; similar to mammalian Mx proteins

YLL061W	MMP1	High affinity S-methylmethionine permease

YMR198W	CIK1	spindle pole body associated protein

YNL072W	RNH35	RNase H(35), a 35 kDa ribonuclease H

s: -499 to -401 nt upstream of the ATG start codon: 13 genes

YAL001C	TFC3	transcription factor tau (TFIIIC) subunit 138

YBR275C	RIF1	RAP1-interacting factor, involved in establishment of repressed chromatin

YDR252W	BTT1	negative regulator of RNA polymerase II

```
YEL018W		
```

YER003C	PMI40	mannose-6-phosphate isomerase

```
YER118C	SSU81	Transmembrane osmosensor
```

YIL140W	SRO4	localizes to the plasma membrane

YIR017C	MET28	transcriptional activator in the Cbf1p-Met4p-Met28p complex

YJR137C	ECM17	Putative sulfite reductase

YKL067W	YNK1	Nucleoside diphosphate kinase

YKR010C	TOF2	topoisomerase I interacting factor 2

YNL126W	SPC98	spindle pole body component, associates in a complex with Spc97p and Tub4p perhaps as part of the microtubule attachment site of the SBP

YNL304W	YPT11	similar to Ypt1 and other Ras-like GTP-binding proteins

s: -400 to -302 nt upstream of the ATG start codon: 13 genes

YBL002W	HTB2	Histone H2B (HTB1 and HTB2 code for nearly identical proteins)

```
YBR296C	PHO89	Probable Na+/Pi symporter
```
```
YDR113C	PDS1	42-kDa nuclear protein
```

YDR252W	BTT1	negative regulator of RNA polymerase II

```
YEL018W		
```
```
YER118C	SSU81	Transmembrane osmosensor
```

YFR027W	ECO1	involved in establishment of cohesion between sister chromatids

YJR006W	HYS2	DNA polymerase delta 55 KD subunit

YJR137C	ECM17	Putative sulfite reductase

YKL067W	YNK1	Nucleoside diphosphate kinase

YKR001C	VPS1	putative GTP-binding protein; similar to mammalian Mx proteins

```
YLR455W		
```

YMR198W	CIK1	spindle pole body associated protein

s: -301 to -203 nt upstream of the ATG start codon: 16 genes

YAL001C	TFC3	transcription factor tau (TFIIIC) subunit 138

YAR008W	SEN34	34kDa subunit of the tetrameric tRNA splicing endonuclease

YBL003C	HTA2	Histone H2A (HTA1 and HTA2 code for nearly identical proteins)

```
YBR184W		
```

YBR275C	RIF1	RAP1-interacting factor, involved in establishment of repressed chromatin

YCR035C	RRP43	Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p).

YCR065W	HCM1	Transcription factor (fork head domain)

```
YDL094C		
```

YHR172W	SPC97	spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP

YIL140W	SRO4	localizes to the plasma membrane

YKR001C	VPS1	putative GTP-binding protein; similar to mammalian Mx proteins

YLR045C	STU2	spindle pole body component

YLR228C	ECM22	involved in cell wall biogenesis (putative)

```
YMR048W		
```

YNL304W	YPT11	similar to Ypt1 and other Ras-like GTP-binding proteins

```
YOR284W		
```

s: -202 to -104 nt upstream of the ATG start codon: 10 genes

YBR275C	RIF1	RAP1-interacting factor, involved in establishment of repressed chromatin

YBR276C	PPS1	dual specificity protein phosphatase

YDR252W	BTT1	negative regulator of RNA polymerase II

YFR027W	ECO1	involved in establishment of cohesion between sister chromatids

```
YJL115W	ASF1	involved in silencing
```
```
YLL062C		
```

YNL126W	SPC98	spindle pole body component, associates in a complex with Spc97p and Tub4p perhaps as part of the microtubule attachment site of the SBP

```
YNL176C		
```

YOR026W	BUB3	cell cycle checkpoint protein

YPL016W	SWI1	Zinc-finger transcription factor

s: -103 to -5 nt upstream of the ATG start codon: 21 genes

YBL003C	HTA2	Histone H2A (HTA1 and HTA2 code for nearly identical proteins)

YCR035C	RRP43	Component of the exosome 3->5 exoribonuclease complex with Rrp4p, Rrp41p, Rrp42p and Dis3p (Rrp44p).

```
YDR113C	PDS1	42-kDa nuclear protein
```
```
YDR179C		
```
```
YEL017W		
```

YER001W	MNN1	Alpha-1,3-mannosyltransferase

YER016W	BIM1	microtubule-binding protein

YER017C	AFG3	ATP-dependent metalloprotease

YFR027W	ECO1	involved in establishment of cohesion between sister chromatids

YHR172W	SPC97	spindle pole body component, associates in a complex with Spc98p and Tub4p perhaps as part of the microtubule attachment site of the SBP

YIL140W	SRO4	localizes to the plasma membrane

YJR137C	ECM17	Putative sulfite reductase

YKR010C	TOF2	topoisomerase I interacting factor 2

```
YLR151C		
```

YLR228C	ECM22	involved in cell wall biogenesis (putative)

```
YMR048W		
```

YMR198W	CIK1	spindle pole body associated protein

YNL126W	SPC98	spindle pole body component, associates in a complex with Spc97p and Tub4p perhaps as part of the microtubule attachment site of the SBP

```
YOL019W		
```
```
YOR284W		
```

YPL016W	SWI1	Zinc-finger transcription factor

g2: -598 to -500 nt upstream of the ATG start codon: 7 genes

YIL106W	MOB1	(putative) transcriptional regulator involved in mitosis

```
YIL131C	FKH1	
```

YJL099W	CHS6	involved in chitin biosynthesis

YKL049C	CSE4	high similarity to histone H3 and to human centromere protein CENP-A

```
YLL047W		
```
```
YOR073W		
```
```
YOR273C		
```

g2: -499 to -401 nt upstream of the ATG start codon: 12 genes

```
YBR043C		
```
```
YCL063W		
```

YDR389W	SAC7	GTPase activating protein (GAP) for RHO1

```
YDR451C		
```

YDR464W	SPP41	negative regulator of prp genes

```
YIL158W		
```

YIL169C		serine-, threonine-rich protein

```
YKL048C	ELM1	protein kinase
```
```
YKL053W		
```

YKL068W	NUP100	Nuclear pore complex protein homologous to Nup116p

YPL116W	HOS3	sequence similar to the histone deacetylase Hda1p

YPR111W	DBF20	kinase required for late nuclear division

g2: -400 to -302 nt upstream of the ATG start codon: 12 genes

YBR104W	YMC2	mitochondrial carrier protein

YCL014W	BUD3	involved in bud site selection

YCR084C	TUP1	glucose repression regulatory protein, exhibits similarity to beta subunits of G proteins

YIL169C		serine-, threonine-rich protein

YJL099W	CHS6	involved in chitin biosynthesis

```
YKL048C	ELM1	protein kinase
```
```
YKL053W		
```
```
YLL046C	RNP1	ribonucleoprotein 1
```

YOR188W	MSB1	involved in polarized growth

```
YOR273C		
```

YPL116W	HOS3	sequence similar to the histone deacetylase Hda1p

YPR111W	DBF20	kinase required for late nuclear division

g2: -301 to -203 nt upstream of the ATG start codon: 9 genes

YBL097W	BRN1	involved in chromosome maintenance; similar to Drosophila barren, Xenopus XCAP-H, and human BRRN1

```
YDR325W		
```
```
YDR451C		
```

YKL049C	CSE4	high similarity to histone H3 and to human centromere protein CENP-A

```
YKL069W		
```

YLR014C	PPR1	zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type

```
YMR215W		
```

YPL116W	HOS3	sequence similar to the histone deacetylase Hda1p

YPR111W	DBF20	kinase required for late nuclear division

g2: -202 to -104 nt upstream of the ATG start codon: 11 genes

YBL097W	BRN1	involved in chromosome maintenance; similar to Drosophila barren, Xenopus XCAP-H, and human BRRN1

```
YBR043C		
```
```
YCL012W		
```
```
YCL012W		
```
```
YDR324C		
```

YIL106W	MOB1	(putative) transcriptional regulator involved in mitosis

```
YJR110W		
```
```
YKL069W		
```
```
YLL047W		
```

YOL012C	HTA3	An evolutionarily conserved member of the histone H2A F/Z family of histone variants

```
YOR073W		
```

g2: -103 to -5 nt upstream of the ATG start codon: 8 genes

```
YBR038W	CHS2	chitin synthase 2
```

YDL198C	YHM1	(putative) mitochondrial carrier protein

YER069W	ARG5,6	N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase

YIL106W	MOB1	(putative) transcriptional regulator involved in mitosis

```
YIL131C	FKH1	
```
```
YIL158W		
```
```
YJR110W		
```
```
YLR015W		
```

m: -598 to -500 nt upstream of the ATG start codon: 4 genes

```
YKR021W		
```
```
YML034W		
```
```
YOL014W		
```

YOR058C	ASE1	encodes component of the spindle midzone

m: -499 to -401 nt upstream of the ATG start codon: 13 genes

```
YAR018C	KIN3	protein kinase
```

YCR042C	TSM1	TATA binding protein-associated factor (TAF)

```
YGL116W	CDC20	beta-transducin homolog
```

YGR092W	DBF2	Serine/threonine protein kinase

```
YIL167W		
```

YJL079C	PRY1	Similar to plant PR-1 class of pathogen related proteins

YLR131C	ACE2	zinc finger transcription factor

YLR353W	BUD8	involved in bud site selection

```
YML034W		
```
```
YML119W		
```

YMR032W	HOF1	SH3 domain containing-protein

```
YNL058C		
```

YPR119W	CLB2	G(sub)2-specific B-type cyclin

m: -400 to -302 nt upstream of the ATG start codon: 7 genes

```
YBR138C	HDR1	Unknown
```
```
YCL038C		Membrane transporter
```

YGL201C	MCM6	component of MCM initiator complex involved in DNA replication

YGR092W	DBF2	Serine/threonine protein kinase

YGR108W	CLB1	G(sub)2-specific B-type cyclin

YLR131C	ACE2	zinc finger transcription factor

YLR353W	BUD8	involved in bud site selection

m: -301 to -203 nt upstream of the ATG start codon: 11 genes

YAL022C	FUN26	predicted membrane protein

YHR152W	SPO12	20 kDa protein with negatively charged C-terminus required for function; thought to be a positive regulator of exit from M-phase in mitosis and meiosis. Spo12p interacts with Dbf2p and Dbf20p protein kinases.

```
YIL161W		
```
```
YKL129C	MYO3	myosin I
```

YLR353W	BUD8	involved in bud site selection

```
YML119W		
```
```
YNL058C		
```
```
YOL014W		
```

YOR058C	ASE1	encodes component of the spindle midzone

```
YPL186C		
```

YPR119W	CLB2	G(sub)2-specific B-type cyclin

m: -202 to -104 nt upstream of the ATG start codon: 12 genes

YCL037C	SRO9	involved in actin filament organization

```
YGL116W	CDC20	beta-transducin homolog
```

YGL201C	MCM6	component of MCM initiator complex involved in DNA replication

YGR279C	SCW4	soluble cell wall protein; can be released from SDS-extracted cell walls under reducing conditions

```
YKL129C	MYO3	myosin I
```
```
YKR021W		
```

YLR353W	BUD8	involved in bud site selection

YNL053W	MSG5	Dual-specificity protein tyrosine phosphatase

```
YOL070C		
```
```
YPL186C		
```

YPL242C	IQG1	Similar to mammalian IQGAP proteins

```
YPR157W		
```

m: -103 to -5 nt upstream of the ATG start codon: 11 genes

YGR092W	DBF2	Serine/threonine protein kinase

YGR143W	SKN1	encodes a predicted type II membrane protein highly homologous to Kre6p

YJL079C	PRY1	Similar to plant PR-1 class of pathogen related proteins

```
YKL130C	SHE2	involved in cell polarity
```

YLR131C	ACE2	zinc finger transcription factor

```
YLR190W		
```
```
YML034W		
```

YMR032W	HOF1	SH3 domain containing-protein

YNL053W	MSG5	Dual-specificity protein tyrosine phosphatase

```
YNL058C		
```

YOR058C	ASE1	encodes component of the spindle midzone

From Table IIb: Position-dependent, orientation-dependent pentamers TAATA is found in the upstream regions of these cell cycle-regulated yeast genes in the following intervals:

From Table IIb: Position-dependent, orientation-dependent pentamers
TAATA
is found in the upstream regions of these cell cycle-regulated yeast genes in the following intervals: