Position independent CGCGAA

From Table Ia: Position-independent, orientation-independent hexamers
CGCGAA and/or TTCGCG
are found in the upstream regions of these cell cycle-regulated yeast genes:

early_g1: 9 genes

```
YDL181W	INH1	ATPase inhibitor
```
```
YER111C	SWI4	transcription factor
```

YKL116C		probable serine/threonine-specific protein kinase (EC 2.7.1.-)

YLL040C	VPS13	component of peripheral vacuolar membrane protein complex

```
YLR049C		
```

YLR079W	SIC1	Cdc28p-Clb5 protein kinase inhibitor

YLR273C	PIG1	Protein similar to Gac1p, a putative type 1 protein phosphatase targeting subunit

YLR274W	CDC46	MCM initiator complex protein

```
YOR264W		
```

late_g1: 58 genes

```
YBR070C		involved in osmotolerance
```
```
YBR071W		
```

YBR073W	RDH54	Putative helicase similar to RAD54

YBR088C	POL30	profilerating cell nuclear antigen (PCNA); accessory factor for DNA polymerase delta, mRNA increases in G1, peaks in S in mitosis, and increases prior to DNA synthesis in meiosis

YBR278W	DPB3	C and C' subunits of DNA polymerase II

```
YCL024W		Ser/Thr protein kinase
```

YDL003W	MCD1	involved in mitosis, similar to pombe Rad21

```
YDL010W		
```
```
YDL127W	PCL2	G1 cyclin
```
```
YDL164C	CDC9	DNA ligase
```

YDL227C	HO	Homothallic switching endonuclease

```
YDR013W		
```

YDR507C	GIN4	putative serine/threonine kinase

```
YGL027C	CWH41	glucosidase I
```
```
YGR109C	CLB6	B-type cyclin
```

YGR152C	RSR1	GTP-binding protein, ras superfamily

YHR038W	FIL1	Putative mitochondrial ribosome recycling factor

```
YHR153C	SPO16	sporulation protein
```
```
YHR154W	ESC4	involved in silencing
```
```
YJL181W		
```
```
YJL187C	SWE1	protein kinase homolog
```

YJR043C	POL32	third (55 kDa) subunit of DNA polymerase delta

YKL042W	SPC42	component of the spindle pole body

YKL101W	HSL1	Putative protein kinase homologous to S. pombe cdr1/nim1

YKL165C	MCD4	(putative) involved in cell polarity

YKR013W	PRY2	Similar to plant PR-1 class of pathogen related proteins

```
YKR077W		
```
```
YKR083C		
```

YLL002W	KIM2	diepoxybutane and mitomycin C resistance

YLL022C	HIF1	interacts with histone acetyltransferase

YLR121C	YPS4	GPI-anchored aspartic protease

```
YLR183C		
```

YLR233C	EST1	involved in telomere length regulation

```
YLR234W	TOP3	DNA Topoisomerase III
```
```
YLR326W		
```
```
YLR376C		
```
```
YLR381W		
```

YLR382C	NAM2	mitochondrial leucyl tRNA synthetase

YLR383W	RHC18	involved in recombination repair

YML027W	YOX1	Homeobox-domain containing protein

```
YMR199W	CLN1	G(sub)1 cyclin
```

YNL082W	PMS1	MutL homolog, similar to Mlh1p, associates with Mlh1p, possibly forming a heterodimer, Pms1p and Msh1p act in concert to bind to a Msh2p-heteroduplex complex containing a G-T mismatch

YNL225C	CNM67	Spindle pole body protein involved in nuclear migration

YNL289W	PCL1	G(sub)1 cyclin that associates with PHO85

```
YNL300W		
```

YNL309W	STB1	Interacts with the putative transcription factor Sin3p

```
YNL310C		
```

YOL007C	CSI2	Appears to be a structural component of the chitin synthase 3 complex

YOL090W	MSH2	MutS homolog encoding major mismatch repair activity in mitosis and meiosis.

YOR317W	FAA1	long chain fatty acyl:CoA synthetase

YPL057C	SUR1	Multicopy suppressor of cls2-2; also suppresses rvs161 mutations

YPL124W	NIP29	spindle pole body associated protein

```
YPL127C	HHO1	histone H1
```

YPL241C	CIN2	involved in microtubule function

```
YPL267W		
```
```
YPR120C	CLB5	B-type cyclin
```
```
YPR174C		
```

YPR175W	DPB2	DNA polymerase epsilon, subunit B

s: 20 genes

YAL001C	TFC3	transcription factor tau (TFIIIC) subunit 138

YAR008W	SEN34	34kDa subunit of the tetrameric tRNA splicing endonuclease

```
YBL063W	KIP1	kinesin related protein
```
```
YBR156C		
```

YBR275C	RIF1	RAP1-interacting factor, involved in establishment of repressed chromatin

YBR276C	PPS1	dual specificity protein phosphatase

YCR065W	HCM1	Transcription factor (fork head domain)

YDL093W	PMT5	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase

YEL061C	CIN8	kinesin-related protein involved in establishment and maintenance of mitotic spindle

YER001W	MNN1	Alpha-1,3-mannosyltransferase

YFR027W	ECO1	involved in establishment of cohesion between sister chromatids

YGR140W	CBF2	110 kDa subunit of the centromere binding factor CBF3

YHR061C	GIC1	interacts with GTPase, involved in bud emergence

YIL140W	SRO4	localizes to the plasma membrane

YKR001C	VPS1	putative GTP-binding protein; similar to mammalian Mx proteins

YLR045C	STU2	spindle pole body component

YNL072W	RNH35	RNase H(35), a 35 kDa ribonuclease H

```
YOL019W		
```

YOR026W	BUB3	cell cycle checkpoint protein

YPL016W	SWI1	Zinc-finger transcription factor

g2: 8 genes

YBL097W	BRN1	involved in chromosome maintenance; similar to Drosophila barren, Xenopus XCAP-H, and human BRRN1

```
YCL063W		
```
```
YCR073C	SSK22	protein kinase
```

YDR389W	SAC7	GTPase activating protein (GAP) for RHO1

```
YIL158W		
```
```
YJL092W	HPR5	DNA helicase
```

YKL049C	CSE4	high similarity to histone H3 and to human centromere protein CENP-A

```
YMR215W		
```

m: 4 genes

YGL201C	MCM6	component of MCM initiator complex involved in DNA replication

YGR279C	SCW4	soluble cell wall protein; can be released from SDS-extracted cell walls under reducing conditions

```
YML033W		
```

YPL242C	IQG1	Similar to mammalian IQGAP proteins

From Table Ia: Position-independent, orientation-independent hexamers CGCGAA and/or TTCGCG are found in the upstream regions of these cell cycle-regulated yeast genes:

From Table Ia: Position-independent, orientation-independent hexamers
CGCGAA and/or TTCGCG
are found in the upstream regions of these cell cycle-regulated yeast genes: