Books

Sequence - Evolution - Function : Computational Approaches in Comparative Genomics
-by Eugene V. Koonin, Michael Y. Galperin
Publisher: Springer; 1 edition (October 1, 2002)
ISBN: 1402072740
Frontiers in Computational Genomics
-by Michael Y. Galperin (Editor), Eugene V. Koonin (Editor) Publisher: Caister (January 2003)
ISBN: 0954246446
Power Laws, Scale-Free Networks and Genome Biology (Molecular Biology Intelligence Unit)
-by Eugene V. Koonin (Editor), Yuri I. Wolf (Editor), Georgy P. Karev (Editor)
Publisher: Springer; 1 edition (March 17, 2006)
ISBN: 0387258833
 

Recent research publications from the group

For all publications in PubMed click here.
  1. Novozhilov AS, Karev GP, Koonin EV. Biological applications of the theory of birth-and-death processes. Brief Bioinform. 2006 Mar;7(1):70-85.
  2. Koonin EV. Systemic determinants of gene evolution and function. Mol Syst Biol. 2005;1:2005.0021. Epub 2005 Sep 13.
  3. Aravind L, Iyer LM, Koonin EV. Comparative genomics and structural biology of the molecular innovations of eukaryotes. Curr Opin Struct Biol. 2006 Jun;16(3):409-19. Epub 2006 May 5.
  4. Makarova KS, Grishin NV, Shabalina SA, Wolf YI, Koonin EV. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct. 2006 Mar 16;1:7.
  5. Makarova KS, Koonin EV, Haselkorn R, Galperin MY. Cyanobacterial response regulator PatA contains a conserved N-terminal domain (PATAN) with an alpha-helical insertion. Bioinformatics. 2006 Jun 1;22(11):1297-301. Epub 2006 Mar 16.
  6. Novozhilov AS, Berezovskaya FS, Koonin EV, Karev GP. Mathematical modeling of tumor therapy with oncolytic viruses: regimes with complete tumor elimination within the framework of deterministic models. Biol Direct. 2006 Feb 17;1(1):6.
  7. Glazko GV, Babenko VN, Koonin EV, Rogozin IB. Mutational hotspots in the TP53 gene and, possibly, other tumor suppressors evolve by positive selection. Biol Direct. 2006 Jan 31;1(1):4.
  8. Martin W, Koonin EV. Introns and the origin of nucleus-cytosol compartmentalization. Nature. 2006 Mar 2;440(7080):41-5.
  9. Prangishvili D, Garrett RA, Koonin EV. Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. Virus Res. 2006 Apr;117(1):52-67. Epub 2006 Feb 28.
  10. Koonin EV, Dolja VV. Evolution of complexity in the viral world: the dawn of a new vision. Virus Res. 2006 Apr;117(1):1-4. Epub 2006 Feb 23.

Interviews and opinions

  1. Editorial for the opening issue of Biology Direct, a new open access journal.
  2. Current Biology carried an interview of Eugene in February, 2004 issue. You can read the interview here.
  3. Eugene's comments regarding peer review in a correspondence to Nature.