Rezarta Islamaj Doğan, PhD
Research Fellow
NCBI, NLM, NIH
8600 Rockville Pike
Building 38A,10N-003D
Bethesda, MD 20894

Tel: (1) (301) 435 8769
Email: islamaj AT ncbi.nlm.nih.gov

PhD, Computer Science,
   University of Maryland at College Park, USA, 2007

• Information retrieval in biomedical literature
• Machine learning, data mining, feature generation
• Computational biology

Selected Publications:

Click-words: Learning to Predict Document Keywords from a User Perspective
with Zhiyong Lu
Bioinformatics, 2010. Bioinformatics-link

Extracting Rx Information from Clinical Narrative
with James G. Mork, Olivier Bodenreider, Dina Demner-Fushman, François-Michel Lang, Zhiyong Lu, Aurélie Névéol, Lee Peters, Sonya E. Shooshan and Alan R. Aronson
JAMIA, 2010. JAMIA-link to fulltext

Understanding PubMed® user search behavior through log analysis
with G. Craig Murray, Aurélie Névéol, and Zhiyong Lu
Database, 2009. Article in PubMed Central

Features Generated for Computational Splice-Site Prediction Correspond to Functional Elements
with Lise Getoor, W. John Wilbur and Stephen M. Mount
BMC Bioinformatics, 2007. Article in PubMed Central

SplicePort: An Interactive Splice-Site Analysis Tool
with Lise Getoor, W. John Wilbur and Stephen M. Mount
Nucleic Acids Research, 2007.Article in PubMed Central

A Feature Generation Algorithm with Applications to Biological Sequence Classification
with Lise Getoor and W. John Wilbur
Chapter in Computational Methods of Feature Selection, Huan Liu and Hiroshi Motoda editors, 2007. SPRINGER-link

Structural footprinting in protein structure comparison: The impact of structural fragments.
with Elena Zotenko, W. John Wilbur, Diane P. O'Leary and Teresa M. Przytycka
BMC Structural Biology, 2007. Article in PubMed Central