NCBI Home GenBank Annotation Examples

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GENERAL REQUIREMENTS
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Examples


mRNA sequence

Prokaryotic gene

Eukaryotic gene

rRNA and/or ITS

Promoter region

Viral sequence

HIV-1

Transposon or insertion sequence

Microsatellite

Repeat regions

Pseudogene

Translocation and/or fusion protein

Cloning vector

Segmented set of exons/introns

Phylogenetic or population studies

EST submissions

STS submissions

GSS submissions

HTGs

FLICs

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  Microsatellite Sequence

Relevant feature information for a microsatellite sequence:
  • unique microsatellite/clone name for each sequence
  • interval of any repeat region(s) within the microsatellite sequence, if known
  • are these considered STS sequences? If so, please see the STS submission requirements.

We strongly suggest that you provide as much of the above information as possible to ensure the most complete annotation of your sequence. If any of this information is not known, please inform us.

Example:

Arabidopsis thaliana ecotype Columbia microsatellite CT12 sequence.

FEATURES             Location/Qualifiers

     source          1..151
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /note="ecotype: Columbia"

     repeat_region   45..76
                     /note="microsatellite CT12"
                     /rpt_type=tandem
                     /rpt_unit=gt


 

Revised November 28, 2000