NCBI Home GenBank Annotation Examples

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GENERAL REQUIREMENTS
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Examples

 mRNA sequence

 Prokaryotic gene

 Eukaryotic gene

 rRNA and/or ITS

 Promoter region

 Viral sequence

 HIV-1

 Transposon or insertion sequence

 Microsatellite

 Repeat regions

 Pseudogene

 Translocation and/or fusion protein

 Cloning vector

 Segmented set of exons/introns

 Phylogenetic or population studies

 EST submissions

 STS submissions

 GSS submissions

 HTGs

 FLICs

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  Eukaryotic Gene

Relevant feature information for a eukaryotic genomic sequence encoding a protein:
  • coding region intervals, including start and stop codons, if present, and all exon intervals
  • protein name
  • gene name, if known
  • amino acid sequence, if known 


We strongly suggest that you provide as much of the above information as possible to ensure the most complete annotation of your sequence. If any of this information is not known, please inform us.

Example:

Caenorhabditis elegans tyrosine kinase PTK-2 (ptk-2) gene,
complete cds.

FEATURES             Location/Qualifiers

     source          1..3180
                     /organism="Caenorhabditis elegans"

     gene            211..3011
                     /gene="ptk-2"
                     
     mRNA            join(211..288,533..703,763..890,940..1024,
     		     1084..1380,1838..1962,2018..2099,2301..3011)
                     /gene="ptk-2"
                     /product="protein kinase PTK-2"
                     
     CDS             join(250..288,533..703,763..890,940..1024,
                     1084..1380,1838..1962,2018..2099,2301..2456)
                     /gene="ptk-2"
                     /product="protein kinase PTK-2"


 

Revised November 28, 2000